New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2288919 =	NA (NA)	12 (1.470)	9/332	0.0	92.3%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	4536236 =	1 (0.120)					intergenic (‑2183/‑361)	topAI/ythB	toxin of the TopAI‑YjhQ toxin‑antitoxin system, TopA inhibitor/protein YthB

ATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTT  >  NC_000913/4536003‑4536472                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             aacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaacaactgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAAcatc                                                                                                                                                                                                                             >  1:157750‑M2/234‑251 (MQ=255)           ggATCAACGTAAGCTTTAAATGTGAGGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAAGTTTAAGGCGACTTTCCTTTTTATTGCGAGTCACCTTGCCTGATTATAAATCTTATTGTGTACCTAATCATTGTCCTGTGCATATGGCGCCTGGGATGAAGTGCGTGTGCTTTAAGAAATGAAATAAAGTGCAAGCAATAATATAATAATGGCCTaaggaaggtgcgaacaagtccctg                                                                                                                                                                                                                     <  1:122154/249‑23 (MQ=255)                                                 gcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTtata                                                                                                                                                                              >  1:153161‑M2/186‑250 (MQ=255)                                                    gaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCg                                                                                                                                                                          >  1:3073‑M2/183‑251 (MQ=255)                                                                                                       ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTc                                                                                                                       >  1:7148‑M2/132‑251 (MQ=255)                                                                                                        cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaccatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCCTTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTcc                                                                                                                      >  1:95468‑M2/131‑251 (MQ=255)                                                                                                                         nggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagcaatgaaatgactgagtcagcagagaagaatttaccagcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATg                                                                                                     >  1:16146‑M2/114‑251 (MQ=255)                                                                                                                                                            gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTCGTTGAACATCATTAAGCATAGCATCATCGTCTATTTGCCAGAATCCGTc                                                                                                                                                                                      <  1:107758‑M2/57‑1 (MQ=255)                                                                                                                                                                    cggctcaaacatgaagaaatgaaatgactgagtaagccgagaagaatttacccgcatattcgcaccttcaCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCt                                                           >  1:148551‑M2/71‑250 (MQ=255)                                                                                                                                                                                   naaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTTATTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCt                                           >  1:30578‑M2/56‑251 (MQ=255)                                                                                                                                                                                                               gaatttccccgcttattcgcaccttccCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTNNTAAtcgnn                                                                                                                                                                        >  2:7551‑M2/28‑96 (MQ=255)                                                                                                                                                                                                                aatttccccgtgtattcgcaccttccCTAATTGCTTTGAACATAATTAAGCATATCATCATCGTCTATTTGCCAGAACCCGTCGGCTTATAACCGCCAGAAGGGCATATCAGGGCGGGGCTGCGAACGCTGTGGCCCAAAACGTTCCAGCAACCTGTGTAGATGTGCGTAGATTACCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTAtgn              <  1:103299‑M2/225‑2 (MQ=255)                                                                                                                                                                                                                                cgcaccttccCTAATTTTTTTGAACATCATTAAGCATATCAGCATCGTCTATTTGCCAGAATCCGTCGACTTATAACCGCCAGAACGGCATATCAGGGCGGTGCTGCGAACGCTGGGGCCCAAAACGTTCCAGTAAACTTTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGtttt  <  1:87428‑M2/237‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                             ATGGTAGTCTGGATCAACGTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCAATAATATAATAATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTGTGGCCCAAAACGTTCCAGTAAACTGTGTAGATGTTCGTAGATTTCCGAGCCATAATCGAAAAGGCGCGGATGTCTATTAAGGCATCCGGCTAATCTGTAAGCAATAACAACGGTTTATGCGGTGCGCGTTTT  >  NC_000913/4536003‑4536472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.