| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,303,073 | Δ12 bp | coding (175‑186/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1303073 | 1303084 | 12 | 11 [0] | [0] 11 | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1303072 | 0 (0.000) | 11 (1.350) | 8/332 | 0.1 | 100% | coding (174/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| ? | NC_000913 | 1303085 = | 0 (0.000) | coding (187/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB | |||||
GTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACTATACC > NC_000913/1302849‑1303288 | gtgtCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCAGCTTAATGATCCGtatttcagctacctgaaacaactggcn < 1:32755‑M1/251‑28 (MQ=255) ggCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTCTTTATTCTTATACCTATTTAGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACAGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtc > 1:96746‑M1/1‑178 (MQ=255) aaTGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGTCGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATCTCAGCTGAATGATCCGtagttcagcttcctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatg < 1:154727‑M1/251‑77 (MQ=255) ttCTACGTCGCTGTCTGGAAGCGATTNCGACGCNNTTNATTCTTATTACTATTTCGTNCTNNNTNNNGNACCTCNCGNNGGGAAGCCCNTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAANTATCATCTTNNTGATCCGtatttcagctacctnaaannanngncgcncgn > 2:38380‑M1/1‑161 (MQ=255) ttCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacgg < 1:38380‑M1/193‑33 (MQ=255) ntgGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatcc > 1:41047‑M1/2‑147 (MQ=255) gAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagnnacctgannc > 2:8917‑M1/1‑80 (MQ=255) gAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGtatttcagctacctgaaacaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactgggtgttagtgctggcgttattgccgcattaaaacaaaacac < 1:8917‑M1/251‑189 (MQ=255) gTGATGGCCAATATCGAAGCGAAATCTCATCTTACTGATCCGtatttcagatacctgaaacaactgccgaacggagatttcggtcaatcgcttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagcagcagcatttttccttgcggtaatactgggtgttagtgctggcgttattgccgcattaaaaaaaaacaccaaatgggactataccgtgat > 1:146863‑M1/1‑42 (MQ=255) ccAATATCGAAGCGAAATATCCTCTTAATGATCCGtatttcagctacctgaaccaactggcgcacggtgatttcggtccatcgtttaaatataaagattattcggtcaatgacttggttgcatccagttttcccgtttctgccaaactgggagccgcagcatttttccttgcggtaatactgggtgttagtgctggcgttattgccgcattaaaacaaaacaccaaatgggactataccgtgatggggctg > 1:139534‑M1/1‑35 (MQ=255) gAAATATCATCTTAATGAGCCGtatttcagctacctgaaacaacgggcgcacggtgagttcggtccatcgtttaaatataaagattattcggtcaatgan < 1:31255‑M1/100‑79 (MQ=255) | GTGTCTGATTTTTATCGCATTACAGAAGGCACAGGCCAGAAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTGCCGCATTAAAACAAAACACCAAATGGGACTATACC > NC_000913/1302849‑1303288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |