| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,568,113 | G→A | R406C (CGT→TGT) | glgC ← | glucose‑1‑phosphate adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,568,113 | 0 | G | A | 100.0% | 48.3 / NA | 17 | R406C (CGT→TGT) | glgC | glucose‑1‑phosphate adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/8); total (9/8) | |||||||||||
GGGAAATGCAGGCAACAGTACGCGAGCGTCAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACGACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGAGCGACCTACCCATACTTCCGGTAACAATACGGCGGAATCAATGTTGCAGAATGAATTCACGCGAACGCGCGAGAACAGAACGGACTGCACCACCACCGAACCGGAGATC > NC_000913/3567899‑3568312 | gggAAATGCAGGCAACAGTACGCGAGCGTCAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAACCCTGCATTATCGCTCCTGTTCATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCAt > 1:328825/1‑251 (MQ=255)gggAAATGCAGGCAACAGTACGCGAGCGTCAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTCATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCAt > 1:328816/1‑251 (MQ=255) cncgAGCGTCAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAAcaca > 1:255674/1‑249 (MQ=255) cAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCTGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTGCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTcc < 1:208300/199‑1 (MQ=255) gCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGTGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAgcgg > 1:20901/1‑251 (MQ=255) ggTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAATCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGan < 1:191500/251‑2 (MQ=255) naGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGACTCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCgg > 1:61992/2‑182 (MQ=255) gccgGTTTGAAGCAGCGGGAACATCGCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTATCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACATGCATCTTCCTCTGCGTTTTCACCAAGCACCAGGCCTTCCGGAATAACACAAGCACGATTGATGACTCAGCGGCGCAGTCGGCACGAGCGACCTACCCATACTTCCGGTAACAATAc < 1:313116/251‑1 (MQ=255) aTCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCNCCANNNNnccnnnnnn > 2:205241/1‑143 (MQ=255) aTCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGAGCGACCTACCCATACTTCCGGTAACAATAcggcn < 1:205241/233‑2 (MQ=255) tGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTCCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTGCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCAcc < 1:217034/128‑1 (MQ=255) ccTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGAGCGAcc < 1:20337/183‑1 (MQ=255) cccTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGTACGAGCGACCTAc > 1:315175/1‑162 (MQ=255) gcgcgTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTCCTCTGCGTTTTCACCACTCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGAGCGACCTACCCATACTTCCGGTAACAATACGGCGGAATCAATGTTGCAGAATGAATTCACGCGAACGCGCGAGAACAGAACGGACTGCACCCCCACCGAACCGGAGATc > 1:228553/1‑241 (MQ=255) gTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACAACGTGCATCTTACTCTGGGTTTTCACCAATCACCAt > 1:136284/1‑74 (MQ=255) ccTTCATCTGAACGATAGAAACAACGTTCATCTTCCTCTGCGTTTTCCCCAATCACCATGCCTTCCGGAATAACACAAGCa < 1:147158/81‑1 (MQ=255) gNNCGATAGNNACAACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACgg < 2:20901/99‑1 (MQ=255) | GGGAAATGCAGGCAACAGTACGCGAGCGTCAACGCCGTCTGCGATTTGTGCTGCGGGTAATGCCCCAATAACATCAGCCAGACCGCCGGTTTTAAGCAGCGGGAACATCTCTGAACATACATGTAAAACCTGCATTATCGCTCCTGTTTATGCCCTAACTTCCGTAGCATTTCGCGCGTTACCAGCACGATGCCTTCTTCTGAACGATAGAAACGACGTGCATCTTCCTCTGCGTTTTCACCAATCACCATGCCTTCCGGAATAACACAAGCACGATCGATGACGCAGCGGCGCAGACGGCACGAGCGACCTACCCATACTTCCGGTAACAATACGGCGGAATCAATGTTGCAGAATGAATTCACGCGAACGCGCGAGAACAGAACGGACTGCACCACCACCGAACCGGAGATC > NC_000913/3567899‑3568312 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |