| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,279,871 | C→T | L320L (CTG→TTG) | kbaZ → | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,279,871 | 0 | C | T | 92.9% | 31.9 / NA | 14 | L320L (CTG→TTG) | kbaZ | putative tagatose‑1,6‑bisphosphate aldolase 1 chaperone |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (6/7); minor base G (0/1); total (6/8) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
CAAAGCGAGCGCCTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGCTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAAC > NC_000913/3279639‑3280121 | cAAAGCGAGCGCCTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGCAAGTTGGCCCAGCGCTGCCCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCg > 1:50625/1‑251 (MQ=255) cTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGACCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTg > 1:98915/1‑232 (MQ=255) tCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACGGGTTCCAGCGAAAGCCGGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCTTCCTCCCGGAATACTGGCAAAGCCACTACCACGGTTACGGCAACGCGCGTCGTCTgg < 1:269772/223‑1 (MQ=255) gcgcCAGCTGGTGATTGACCACTTTGCCATTCTTAAAGTGGGCCCAGCGCTGACCTTCTCCCTGCGTGAAGCTCTTTGCTCTCTGGCGGCGATTGAAGAAGACCTGTTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCgg < 1:229728/170‑1 (MQ=255) aGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCGCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAAGTGGTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCGGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCg < 1:327905/251‑1 (MQ=255) ttaaGCTCTGTCCTCTCTGTCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATg < 1:207440/89‑1 (MQ=255) ggcgATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGgcg > 1:4590/1‑133 (MQ=255) gCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCTGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATTACGCTTTCTCTCTTCTGGTACGTAATCTGGCGTATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGc < 1:52632/245‑1 (MQ=255) gAAAGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGa > 1:175662/1‑57 (MQ=255) aGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACa > 1:185865/1‑149 (MQ=255) aGCCTGTTCTGGTCTGCGTCAGGTGTTGGAAGACGGGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACgn < 1:35234/84‑2 (MQ=255) nntCTGGTNNGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGgcg < 2:4590/96‑1 (MQ=255) cTGCGTCAGGTGTTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTATCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGCTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCg > 1:131493/1‑250 (MQ=255) gCGTCAGGTGTTGGAAGACGTGATGCTTGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACTGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCTGACAGCCAGATTGATTACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTTATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGc < 1:212848/251‑1 (MQ=255) cTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAAc > 1:17127/1‑251 (MQ=255) | CAAAGCGAGCGCCTTAAGCCAGATGGTCGAAAACTACGAAACGCTGATTTTCGAAGCGCACTCTACCGATTATCAAACGCCGCAATCGCTGCGCCAGCTGGTGATTGACCACTTTGCCATTCTGAAAGTTGGCCCAGCGCTGACCTTCGCCCTGCGTGAAGCTCTGTTCTCTCTGGCGGCGATTGAAGAAGAACTGGTGCCAGCGAAAGCCTGTTCTGGTCTGCGTCAGGTGCTGGAAGACGTGATGCTCGACCGCCCGGAATACTGGCAAAGCCACTACCACGGTGACGGCAACGCGCGTCGTCTGGCGCGTGGTTATAGCTACTCGGATCGCGTGCGCTATTACTGGCCGGACAGCCAGATTGATGACGCTTTCGCTCATCTGGTACGTAATCTGGCGGATTCACCAATTCCGCTGCCGCTGATCAGCCAGTATCTGCCGCTGCAGTACGTGAAAGTTCGCTCCGGCGAGCTGCAGCCAAC > NC_000913/3279639‑3280121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |