| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,652,331 | T→C | intergenic (+2346/+397) | ydfD → / ← ynfP | lysis protein/protein YnfP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,652,331 | 0 | T | C | 100.0% | 30.2 / NA | 10 | intergenic (+2346/+397) | ydfD/ynfP | lysis protein/protein YnfP |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (4/6); total (4/6) | |||||||||||
GCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACC > NC_000913/1652133‑1652544 | gCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATTATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTTATGTTCACCTCAGAGAGTATGGCAGATCAGAAAAACAAAAATGCACCTTTGTTTTTCAAcc < 1:136979/251‑1 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCGGATGACATTAACGAGACTGAGCAAAGAGCAGATCATTGATGTTCACCTCAGAGATGATGGTAGAACAGAAAAACAAAAATGCACCTGTTTTTTTCAACCGGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCATTGAc < 1:328569/251‑1 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag > 1:249321/1‑219 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTTTTAAGCCAGCAATCTACGCGCTCCGGATGCAGATGACATTAACGAGACTGAGCAAATATCATTTCATTGATGATCACCTCAGAGAGTATGGGAGAACAGAAAAACAAAAATGCACCTTTTGTTTTCa < 1:48252/179‑1 (MQ=255) gTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTTATTCATCTTATTAAGCAAGCAATCGACGACCTCCGGAGGCAGACGACATTAACGAGACTGAGCAACAAACATATCATTGATGTTCACCTCCGAGAGTATGGCAGAACAAAAAAACAAAAATTCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCCTTTTACCGTTGACTCAATAAGGCCGATTTGGGAc > 1:156278/1‑251 (MQ=255) gTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAg < 1:120946/154‑1 (MQ=255) aGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGc < 1:239174/85‑1 (MQ=255) gACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATAGCATTGATGTTCACCTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTg < 1:51273/106‑1 (MQ=255) ctctCCGGAGTCAGATGACATTAACGCGACTGAGCAAAGAGCATATCATTGATCCTCCCCACAGAGAGCATGGCCGCACAGACAAACAAACATACACCTTTGTTTTTCCACCTGAAGTGTCAGCGAGAGAAAAACATTATGGTGACCATTTTACCGTTGACTCAATAAg > 1:312074/1‑169 (MQ=255) gaCGAGACTGAGCAAAGAGCATATCATTGATGTTCACCTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCAACTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAAcc > 1:109496/2‑251 (MQ=255) | GCACTTGGATGGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAGTAAAAAATTATGGTGACCATTTTACCGTTGACTCAATAAGGCAGATGTGGGACGCAGCGATAAAACGTGCCGGACTCCGCCATCGAAAATCATATCAGTCGAGACATACTTATGCCTGCTGGTCGCTGACAGCTGGTGCTAACC > NC_000913/1652133‑1652544 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |