| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,353,758 | T→A | D254V (GAT→GTT) | sapC ← | putrescine ABC exporter membrane protein SapC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,353,758 | 0 | T | A | 100.0% | 37.6 / NA | 16 | D254V (GAT→GTT) | sapC | putrescine ABC exporter membrane protein SapC |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (10/6); total (10/6) | |||||||||||
GTCATACTTACCCGGTCGACGGCTTTAACCCACTCATCACCGGTTTTAAATTCAATGGTCAGGTTACGAATATCGAGTAATGGCATTATTCCACCCCCGCAATAATCGCACGACGAACGCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCATCACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCACAGCAAACCAGAGAATATTCAGCGTTGATGCGCCATCCAGACGGGCGGCGATAACGTACTCTTTTTCCAGTTCGTCATGCACCATGCTGTAAATCGAACG > NC_000913/1353543‑1353996 | gTCATACTTACCCGGTCGACGGCTTTAACCCACTCATCACCGGTTTTAAATTCAATGGTCAGGTTACGAATATCGAGTAATGGCATTATTCCACCCCCGCAATAATCGCACGACGAACGCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCGCCTGGCAGCATGTCAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTc < 1:187136/231‑1 (MQ=255) ttAACCCACTCATCACCGGTTTTAAATTCAATGGTCAGGTTACGAATATCGAGGAATGGCAGTATTCCTCCCCCGCAATAATCGCACGACGAACGCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTTCCGCACCTGTCAGCATGACAGTCCACGGGGCTATATAAATCAGTTCCAGCGCAACACCTAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGc < 1:218896/249‑1 (MQ=255) cTCATCACCGGTTTTAAATTCAATGGTCAGGTTACGAATATCGAGTAATGGCATTATTCCCCCCCCGCAATAATCTCACAACGAACGCCATCGCCAAGGAGTTTAACCAACAACACGGTAATCATAATTGCCGCCCCTGGCAGCATGACAGTCCACGGGGCGACATAAAGCAGTTCCAGCGCAACACTGATGATCGCTCCCCAGTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCa < 1:156382/244‑1 (MQ=255) cccccGCAATAATCGCACGACGAACGCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCAAGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCAGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATg > 1:159009/1‑251 (MQ=255) cgacgaACGACATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGt > 1:260214/1‑206 (MQ=255) gCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGcc > 1:155896/1‑215 (MQ=255) naaGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCAAAGCAAACCAGAGAATATTCAGc > 1:192761/2‑251 (MQ=255) aggTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGCTGTTTGGCATCACAGCAAACCAGCGAATATTCCGCGTTg > 1:157800/1‑250 (MQ=255) ggTTAACCAACAACNCGCTAATCATAATTGCCGCACCTGGCAGCATNANAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCNCCCCATTCAGNCGANNGGAGNTNTNCTCCGAGATCGAGAAAGCCCAGCGCGGCGNTATCGAGAATTGCCATCGACAGTNNGCNNNTGNNCTCgg < 2:236358/192‑1 (MQ=255) ggTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCCGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGCAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCgg > 1:236358/1‑192 (MQ=255) gTCCACGGGGCGACATAAAGCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCGCAGCAAATCAGAGAATATTCAGCGTTGGTGCGCCATCCAGACGGGCGGCGATAACGTACTCTTGTTCCAGTTCGTCATg < 1:236940/251‑1 (MQ=255) aCATAAATCAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCACAGCAAACCAGAGAATATTCAGCGTTGATGCGCCATCCAGACGGGCGGCGATAACGTACTCTTTTTCCAGTTCGTCATGCACCATGCTGt > 1:212406/1‑250 (MQ=255) gntgNTCCAGNGCAANACCGAGCATCGCTCCNCATTCAGGCGAGGGGAGTTNNGNGCCTANATCga < 2:130383/63‑1 (MQ=255) cAGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCAGAGTTCGCGTAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGATTGGCATCACAACCAACCAGCGGATATTCAGCGTTGATGGGCCATCCAGCCGGGCGGCGCTAAAGGCCTCTTTTTACAGATCGTCATGCACCATGCTGTAAATCGAAc > 1:298033/1‑251 (MQ=255) aGTTCCAGCGCAACACCGAGCATCGCTCCCCATTCAGGCCAGGGGAGTTGTGCGCCGAGCTCGAGAAAACCCAGCGCGGCGATATCAAGACTTGCCCTCGACAGAGCGCGGCTGCTCTCGGTGACCACCCCGACGGTGATGTTTAGCACCCCAGCAAACCAGAGAACATTCAGCGTTGCTGCGCCATCCAGACTGGCGGCGATAACGTACTCTTTTTCCAGTTCGTCATGCACCAAGCTCTAAATCGAACg > 1:47805/1‑251 (MQ=255) nttCCAGCGCAACACCGCGCATCGCTACCAATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCACAGCAAACCAGAGAATATTCCGCGTTGATGCGCCATCCAGACg > 1:96486/2‑193 (MQ=255) | GTCATACTTACCCGGTCGACGGCTTTAACCCACTCATCACCGGTTTTAAATTCAATGGTCAGGTTACGAATATCGAGTAATGGCATTATTCCACCCCCGCAATAATCGCACGACGAACGCCATCGCCAAGGAGGTTAACCAACAACACGCTAATCATAATTGCCGCACCTGGCAGCATGACAGTCCACGGGGCGACATAAATCAGTTCCAGCGCATCACCGAGCATCGCTCCCCATTCAGGCGAGGGGAGTTGTGCGCCGAGATCGAGAAAGCCCAGCGCGGCGATATCGAGAATTGCCATCGACAGTGCGCGGGTGATCTCGGTGACCAGCCCGGCGGTGATGTTTGGCATCACAGCAAACCAGAGAATATTCAGCGTTGATGCGCCATCCAGACGGGCGGCGATAACGTACTCTTTTTCCAGTTCGTCATGCACCATGCTGTAAATCGAACG > NC_000913/1353543‑1353996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |