| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 669,952 | G→A | N207N (AAC→AAT) | nadD ← | nicotinate‑nucleotide adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 669,952 | 0 | G | A | 86.7% | 25.1 / ‑2.4 | 15 | N207N (AAC→AAT) | nadD | nicotinate‑nucleotide adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (7/6); total (9/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.80e-01 | |||||||||||
CGCGCGGTATGCTGTGCCCGTTCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAGGGGGGTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGGTTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGCTGGTATTGCGGTTGCGCCATTTCAAGTGGGTAACCTGGACGCCGACAGACGATCAAATGTG > NC_000913/669720‑670193 | cgcgcgGTATGCTGTGCCCGTTCCAGTTCACTGCATAAAACCAGATCAAAGGAAACAACATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAGGGGGGTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAAGTCAGTAcc > 1:98285/1‑251 (MQ=255) gcgcgGTATGCTGTGCCCGTTCCAGTTCACTGCATAAAACCAGATCAAAGGAAACTCCATGTAGCAGCGTATGCAGATTTTGCGCTGGCGCAATACCGCGCGCGGTCAGGGGGGTGTGCGCATGACCGCTGTAAAGACCATCGATATGCTCTTGCGTGTCACCATGACTAAGTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCATCGATACAAGCCTTGTTGATTAATGTAAGTCAGTACCg < 1:241800/251‑1 (MQ=255) ccGTTCCAGTTCACTGCATAAAACCAGATCAAAGGAAACTCCAGGTAGCGGCGTATGCAGATTTTGCGCTTGCTCAATGCCGCTCGGGGTCAGGGGGGTGGGCGCATGACTGCTGTAAAGACGATCGATAGGCGCGTGCGTTGCACCATGACGAGGTAACCACAGTCGCAAGATGCCCTCCGTAACGACAGGTATCAGCTATACAAGCCTTGTGGATTAATGTAAGTCAGTACCGGTTCCGGCAATAAATc < 1:187346/251‑1 (MQ=255) cgcgGTCAGGGTGGTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGGTTCACCATTACGAAGTAACCACAGTCGCATCAGGCGCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAATTCAGTACCg < 1:241809/151‑1 (MQ=255) cgcgGNNAGNNNGGNNGGCGCATGACCGCTGTAAAGACCNTCGATATTCGCTTGCGTTTCAACATGACGNANTNACCANNGTCNCATCATGCCCNCCGTAACGACAGGTATCAGCGATCCAAGCCTTGTTGATTCATGTAAGTNANTCCCg > 2:241809/1‑151 (MQ=255) ggggggggGCGCATGACCGCTGGAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGGCGCATCATGCCCGCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAAGTCAGTCCCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGTTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAgg < 1:27811/251‑1 (MQ=255) ngggTGGGCGCATGACCGCTGTAAAGACCATCGCTATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGGTTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGc > 1:200287/2‑251 (MQ=255) ggggTGGGCGCATGACCGCTGTACAGACCATCGATATTCGCTTGCGTTTCCCCCTGACGAATTAACCCCCGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTc > 1:135683/1‑169 (MQ=255) cgcATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACCGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGCTACAAGCCTTGTTGATTAATGTAAGTCAGTACCGGTTCCGGCAATa > 1:146773/1‑145 (MQ=255) tCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGt < 1:252035/144‑1 (MQ=255) cGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGATTAATGTAAGACAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTc < 1:318260/250‑1 (MQ=255) ccATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGGTTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGc > 1:88070/1‑251 (MQ=255) gCCCTCCGTAACGACAGGTATCAGCGATCCAAGCCTTGTTGATTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGCTGGTATTGCGGTTGCGCCATTTCAAGTgg > 1:273906/1‑251 (MQ=255) ggTATCAGCGATACAAGCCTTGTTGATTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGCCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGCTGGTATTGCGGTTGCGCCATTTCAAGTGGGTAACCTGGACGCCg > 1:296342/1‑250 (MQ=255) gCCTTGTTGATTAATGTAAGTCAGTACCGGTTACGGCACTAAATCCTCACATGATTTACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCCGATAAATTTTACCGGCAGGCTGACGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGCTGGTATTGCGGTTGCGCCATTTCAAGGGGGTAACCTGGACGCCGACAGACGATCAAAtgtg > 1:312794/1‑251 (MQ=255) ggTTANTGTAANTNNGTCCCGGTTCTGGCAATAANTCCTCACATGATTCANCGTTNTGCAANCGnt > 2:131099/1‑66 (MQ=255) ggTTAATGTAAGTCAGTACCGGTTCCGGCAATAAAGCCTCACAGGATTCACCGTTTTGCAAACGTTCGCGGATGAGGGTCGCCGAGATGTTAAACCACGGCGTTTCAGcc < 1:131099/110‑1 (MQ=255) | CGCGCGGTATGCTGTGCCCGTTCCAGTTCACTGCATAAAACCAGATCAAAGGAAACACCATGTAGCAGCGTATGCAGATTTTGCGCTTGCTCAATACCGCGCGCGGTCAGGGGGGTGGGCGCATGACCGCTGTAAAGACCATCGATATTCGCTTGCGTTTCACCATGACGAATTAACCACAGTCGCATCATGCCCTCCGTAACGACAGGTATCAGCGATACAAGCCTTGTTGGTTAATGTAAGTCAGTACCGGTTCCGGCAATAAATCCTCACATGATTCACCGTTTTGCAAACGTTCGCGGATGATGGTCGCCGAGATGTTAAACCACGGCGTTTCAGCCAGATAAATTTTACCGGCAGGCTGAAGGTGAAGATCTTCCGGGTTATGTGTCAAATGATCTTCCAGCCATTGCTGGTATTGCGGTTGCGCCATTTCAAGTGGGTAACCTGGACGCCGACAGACGATCAAATGTG > NC_000913/669720‑670193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |