| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,410,466 | C→T | L112F (CTT→TTT) | yjfI → | DUF2170 domain‑containing protein YjfI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,410,466 | 0 | C | T | 100.0% | 21.5 / NA | 9 | L112F (CTT→TTT) | yjfI | DUF2170 domain‑containing protein YjfI |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/3); total (6/3) | |||||||||||
CCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATC > NC_000913/4410293‑4410706 | ccTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGTGTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCtn < 1:197734/216‑2 (MQ=255) cTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGCAGATGATGCCGCTGTCATAGGTAGGGATCTCAAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGACGATATCCTGTTTgaga > 1:285221/1‑179 (MQ=255) gCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACCTTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGTTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTg > 1:280270/1‑251 (MQ=255) gATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGACGATATCCTGTTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTAc > 1:43432/1‑192 (MQ=255) gATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGCGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGTTTGCGATAACCTCGCTGGTAGATAACGCCTTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTAc > 1:43421/1‑192 (MQ=255) cGCTTAAATCTTCTCTTGAAGATATCNTGTTTGNNATNACCTCGCTGGTAGATAACGNATNNNANNNGNATGAANTTNNAGAAGAATANTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTTAAAAGTTTATTTACNCTGGGGAAANNGTTTATCTCCCAGGCGGAAGANTCCNNTNNANAAAnccn > 2:73893/1‑192 (MQ=255) gCTTAAATCTTCTCTTGAAGATATCCTGTTTGAGATAAACTAGCTGGTAGATAACGCATTGGATCTGGCTg > 1:127194/1‑71 (MQ=255) tctcTTGAAGATATCCTGTTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCTTGCGCa < 1:270981/193‑1 (MQ=255) aGATATCCTGTTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTTAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATc < 1:73893/251‑1 (MQ=255) | CCTTTATTTGTCCGGTGAGTAGTATCAGCAATCCAGATGAATTTAATACCTTCTTATTAAGAAATCAGAAGATGATGCCGTTGTCATCGGTAGGGATCTCCAGCGTACAACAGGAAGAGTATTACATTGTTTTCGGGGCGTTATCGCTTAAATCTTCTCTTGAAGATATCCTGCTTGAGATAACCTCGCTGGTAGATAACGCATTGGATCTGGCTGAAATTACAGAAGAATATTCACACTAATTACAAGGACGGGTATTTATGGGAATTTTAAAAAGTTTATTTACGCTGGGGAAATCGTTTATCTCCCAGGCGGAAGAATCCATTGAAGAAACCCAGGGCGTGCGCATGCTGGAACAGCATATTCGTGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATC > NC_000913/4410293‑4410706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |