| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,792,772 | IS2 (–) +5 bp | intergenic (‑41/+33) | nlpC ← / ← btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1469240 | NA (NA) | 8 (0.620) | 7/286 | 0.4 | 100% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1792772 = | 0 (0.000) | intergenic (‑41/+37) | nlpC/btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit | |||||
| * | ? | NC_000913 | = 1651548 | NA (NA) | 11 (0.840) | 10/290 | 0.2 | 100% | noncoding (706/706 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1792776 | 0 (0.000) | intergenic (‑45/+33) | nlpC/btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit | |||||
CAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGT > NC_000913/1792536‑1792978 | caAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggctttgcc < 1:308161‑M2/251‑11 (MQ=255) aGTCCACACCGCGCCGCGTCATGCCACCATTACGATAAGGTGTGCCATGACAGATTTGTAGCTGGTCGATCCAACAGGCCATAAAGGAAATAGAATCAGAAAGTCTGGCATTTGGAGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTACGGACGGATCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttcc < 1:208554‑M2/250‑22 (MQ=255) aaCGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATACCGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaag > 1:21620‑M2/1‑199 (MQ=255) accgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatgtaagtgatattgtttgtctggagattcagggggccagtctaGCGTCGTAATTGCCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTctgtgn < 1:61871‑M2/65‑2 (MQ=255) ggTCGTTCAACCCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTGCCTCTGTTTTTTATTCTTGCATTAATTTAGcgtc < 1:277104/166‑1 (MQ=255) gancaantnngnncttntcctgggtggtacgccgtctgnntttctccggncctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaanactatcactnngtnaagtgntnnngnnngtntggagattcagggggccagnctnNCGTCGTNATTACCCGATTTTCAAGATACTAATg < 2:75567‑M2/34‑1 (MQ=255) attgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCtg < 1:122710‑M2/62‑1 (MQ=255) ggCAATAACGGTAATCGAATCAGAAANTCTGGCNNTTNGCGGCGGTGCTTTATGGTGNCTNNNCNNNGNAAGAANCANNGCTGTGATCNAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTNATTTAGCGTNnggatttgcccctatatttccanacanntnntntccnctn < 2:76129‑M2/193‑41 (MQ=255) ggCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc > 1:76129‑M2/1‑153 (MQ=255) gTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaaggccgctgccgcagatattcccgtggcgagcgataacc > 1:113794‑M2/1‑109 (MQ=255) ntaCNCNNGNNCAGNAGCAGTGCTGTGATCAAAATANNGCAGAAACGNATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggattngcccctatanngcnagacancnnntnnnacntaacccatgacaagcccgcngcnncagatantcccgtggcgagcgataacccagcgc > 2:76041‑M2/2‑95 (MQ=255) cTACACCCGGCCAGTAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgc < 1:76041‑M2/190‑96 (MQ=255) gnnnnncaangactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCa < 2:200516‑M2/54‑1 (MQ=255) naccCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccaga < 1:78252‑M2/115‑25 (MQ=255) cacttatttaagtgatatgggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCGTTGTCCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGGGGCGTGAGCACCTCTTCCCTGCGGCCACTTGCCAGCATTGTGCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAAtg < 1:50505‑M2/201‑1 (MQ=255) gCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatattgccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccagtcgttataatgctcgaacgcctctgcaaggttctttgcggccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcg > 1:185219‑M2/1‑49 (MQ=255) gCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCcggatttgcccctatctttcccgacatctgttctcacttcacccatgacaagaccgctgccgcagatattcccgttgggagcgataacccagcgcgctatgcggatgacattcgttataatgctcgaacgcctctgcaaggttctttgc < 1:120291‑M2/198‑150 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATACTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGt < 1:324520‑M2/207‑1 (MQ=255) cagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGAGACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGc < 1:236296‑M2/84‑1 (MQ=255) cagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCtg > 1:74241‑M2/8‑69 (MQ=255) | CAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGT > NC_000913/1792536‑1792978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |