New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1907618 =	4 (0.310)	13 (1.010)	8/286	0.3	76.5%	intergenic (‑27/+643)	yobF/yebO	DUF2527 domain‑containing protein YobF/uncharacterized protein YebO
	?	NC_000913	= 1979270	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

AGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCAGGCAGATACTTAAACTGGCGTATTTTCTAACATAGTTCAATAAGTTCAGTTGTTCCAGGCCAGTGGGAGAAGTTATTACATAGTGCG  >  NC_000913/1907394‑1907859                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                  aGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGGTTTCTTACCCCGCAGGCATACCATAGATAACAATGACACCTTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTCACTGAAAATGCCACACATAAACAGAACTGTAACTCGTTTAACCCGAAATCTGtgggaatgactccaactt                                                                                                                                                                                                                          >  1:284608/1‑233 (MQ=255)                  tAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACg                                                                                                                                                                                                                             <  1:154585/230‑1 (MQ=255)                           gaagcggtgtcagtgcaatgcagttgaaatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaaaaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGt                                                                                                                                                                                               <  1:257437‑M1/53‑1 (MQ=255)                                               cagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgaagttacgctcccccccgtcagtagctgaacaggagggacagatgctagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACACCGTTAATTATGGCCAACCATTTTTAAAAATGTCTCGATCAGACGCACAAAtc                                                                                                                                                                           <  1:238463‑M1/73‑1 (MQ=255)                                                                          gcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGGTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTtgn                                                                                                                                                  >  1:64458‑M1/152‑248 (MQ=255)                                                                                                    tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGAc                                                                                                                                                                                    >  1:88096‑M1/126‑189 (MQ=255)                                                                                                      cttttgccgtgacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaagcaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGTTAATTATgg                                                                                                                                                                                                                   >  1:207494‑M1/124‑156 (MQ=255)                                                                                                                                    gctgaacaggagggacagctgatagaaacagaagccactggaggtcctcaaaaacaccatcatacactaaatcagtaagtttgcagcatcaccGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCGTGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTGGCACACTCATGCAACGGAATACTCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCaggt                                                                                      >  1:56888‑M1/94‑250 (MQ=255)                                                                                                                                    gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGTTAATGATGGCAAGCCATTTTTAAACATGTCGCGATCAGACGCACAAATCTCGATACGTcttn                                                                                                                                                              >  1:40250‑M1/94‑178 (MQ=255)                                                                                                                                              gCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAAATGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTAGATACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCAGGCAGATACTTa                                                                             >  1:131754/1‑250 (MQ=255)                                                                                                                                                 nacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCacac                                                                                                                                              <  1:40204‑M1/102‑1 (MQ=255)                                                                                                                                                                                 cttTACTGAAAATGCCACACATAAACAGAACTGTACCTAGTTTAACCCGAAATCTGTTATCACATACAACGTTCATTAAGGCCAGCCATTTTTAAAAATGACTCGAGCAGACGCACAACTCTCGCTACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACCCACCGCTATATCATTCTGCTTAACCTTGCCAGTTAAGGCAGATCCTTACACTGACGTCTTTTCTAACATAGTTAAATAAGtac                                          >  1:229138/1‑248 (MQ=255)                                                                                                                                                                                            ccatcataccctacatcagtaagttggcagcatcaacGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTATGc                                                                                                                                        <  1:89447‑M1/108‑1 (MQ=255)                                                                                                                                                                                             catcatacactaaagcagtaagttggcagcatcaccGAAATCTTTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTAAGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTTCCAGTTCAGGCAGATACTTAAACTGGCGTATTTTCTAACATAGTTCAAGAAGTTCAGTTGTTCCAGGc                             >  1:208144‑M1/37‑251 (MQ=255)                                                                                                                                                                                                                      ncagcatcaccGAACTCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTCACCATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCAGGCAGATACTTAAACTGGCGTATTTTCTAACATAGTTCAATAAGTTCAGTTGTTCCAGGCCAGTGGGAGAAGTTATTACATAgtg    <  1:95189‑M1/240‑1 (MQ=255)                                                                                                                                                                                                                        agcatcaccGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCAGGCAGATACTTAAACTGGCGTATTTTCTAACATAGTTCAATAAGTTCAGTTGTTCCAGGCCAGTGGGAGAAGTTATTACATAgtgcg  >  1:6586‑M1/10‑251 (MQ=255)                                                                                                                                                                                                                              accGAAATCTGTTATCACATACACCGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATAc                                                                                                                                                                    >  1:106922‑M1/4‑83 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                  AGACTCGTTGAACCACTTAACCTGACCTTTAATCTTTGCCATTTGAAAAATTCCTTAGATTGTTTTCTTCGCCCGCAGGCATAACATAGATAAAACTGACACATTACTGCATGAGGCACCAATATAAGGCTCGGCAGAGAAGCGGTATTCAACGTCAACGTGTTTACTCAGGACTTCTTTACTGAAAATGCCACACATAAACAGAACTGTACCTCGTTTAACCCGAAATCTGTTATCACATACAACGTTAATTATGGCAAGCCATTTTTAAACATGTCTCGATCAGACGCACAAATCTCGATACGTCTTCCACTTTTTTTGCACACTTATGCAACGGAATACGCGCCGATATATCATTGTGCTTAACCTTGCCAGTTCAGGCAGATACTTAAACTGGCGTATTTTCTAACATAGTTCAATAAGTTCAGTTGTTCCAGGCCAGTGGGAGAAGTTATTACATAGTGCG  >  NC_000913/1907394‑1907859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.