Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,294,035	Δ141 bp		[tdk]	[tdk]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1294035	1294175	141	9 [0]	[1] 10	[tdk]	[tdk]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1294034	0 (0.000)	9 (0.740)	7/270	0.4	100%	coding (508/618 nt)	tdk	thymidine/deoxyuridine kinase
	?	NC_000913	1294176 =	0 (0.000)					intergenic (+32/+1270)	tdk/adhE	thymidine/deoxyuridine kinase/fused acetaldehyde‑CoA dehydrogenase and iron‑dependent alcohol dehydrogenasealdehyde/alcohol dehydrogenase AdhE

GCAGCCAATACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGTGGTAATTGGTGGTAATGAACGATACGTTTCTGTATGCCGTAAACACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGGGCTATATACCCTTCTCGGCAGTTTTTTAA  >  NC_000913/1293906‑1294245                                                                                                                                 |                                                                                                                                                                                                                    gCAGCCAATACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAGAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTTATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcacttcttccgggctatatacccttctcggcagttt                                                                                                                                                    <  1:315254‑M1/194‑66 (MQ=255)     ccAATACTTACTGTCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTGTTGTGGCCTTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcactt                                                                                                                                                                                   <  1:317941‑M1/159‑35 (MQ=255)       aaTACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCGTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcacttcttccgggctatataccctgctcggcagtt                                                                                                                                                     <  1:271536‑M1/187‑65 (MQ=255)                                        aaTTAAAAACCATCTGTTTTTGTGACCGTAAAGCAAGGATGGTGCTGCGTCTTGATCAAGCAGGCAGACATTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcact                                                                                                                                                                                    >  1:165402‑M1/1‑90 (MQ=255)                                         aTTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcacttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggc                                                                                                                        <  1:100566‑M1/182‑94 (MQ=255)                                                               ngcCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcacttcttccgggctatatacccttctcggcagttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaat                             >  1:83332‑M1/2‑67 (MQ=255)                                                                                      gcGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgcacttcttccgggctatatacccttctcggcatttttttaacgccgctatacgcctcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatccctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttg      >  1:13867‑M1/1‑44 (MQ=255)                                                                                            tGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGtcacttttatcctgtcagttcgttttacgcacttcttccgggctatatacccttctcggcagttttttaacgccgctatacgccgcacagggctcttaagcaccgacgttgacttgtgacctgtaaagtacaatatctctgtgtttaggcgttatacatcgtcgcaaatatgatgaaggctaatgctgtcggtttatggaaaagttgcttn  <  1:63451‑M1/249‑212 (MQ=255)                                                                                                cAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGgcacttttatcctgtcagttcgttttacgctcttctgccgtgctatataccctt                                                                                                                                                               <  1:89924‑M1/88‑55 (MQ=255)                                                                                                                                 |                                                                                                                                                                                                                    GCAGCCAATACTTACTGGCATGGTCCGACAAACTGGTTGAATTAAAAACCATCTGTTTTTGTGGCCGTAAAGCAAGCATGGTGCTGCGTCTTGATCAAGCAGGCAGACCTTATAACGAAGGTGAGCAGGTGGTAATTGGTGGTAATGAACGATACGTTTCTGTATGCCGTAAACACTATAAAGAGGCGTTACAAGTCGACTCATTAACGGCTATTCAGGAAAGGCATCGCCACGATTAATAAGAATTTCTTTACTGACAGGGTGAGCAGGGCACTTTTATCCTGTCAGTTCGTTTTACGCACTTCTTCCGGGCTATATACCCTTCTCGGCAGTTTTTTAA  >  NC_000913/1293906‑1294245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.