Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 443,558 G→A G28G (GGC→GGT)  yajL ← protein/nucleic acid deglycase 3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913443,5580GA90.9% 24.0 / ‑5.8 11G28G (GGC→GGT) yajLprotein/nucleic acid deglycase 3
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (4/6);  minor base C (0/1);  total (4/7)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCACCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCGGGTGTTTTCCGGTACGGCAATCCCATGCGCGCGGGCGCGGCGTAAGAGAAAACCATTGATATAGTCGATTTCAGTGTGGCGCAGCGCGCGGATATCCTG  >  NC_000913/443318‑443777
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                           
cgcggcgaAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGATTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCCCCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCACCGCGAACca                                                                                                                                                                                                                   <  1:6842/251‑1 (MQ=255)
                                   ggTGGAACTGTTTAACGGTTTCACCCAGCAGAGTGCTATCGCGAAAACTCTCCGCGCCGTTAAGGCCACCAGGCAGCACGATCACGTCATATTGGCCGTCAGCCACTTCGCCTAGCGGCGCATCCGCCAGCAGCTGCGCGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCGGGCGACGCTGGCCGTGGTGTCTTTGATACCCCCGCGAACCGGCAGGTCGATAGTGGTTACGGCTTCAGTCTCTTCa                                                                                                                                                                                <  1:182031/251‑1 (MQ=255)
                                                                  agTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCATCAGGCGGCACGATCACGTCATATTCACCATCAGCCACTTGGACCAGCGGGGCAGCCGCCAGCAGCTTCACGGCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGTCGATGCTGGCAGTGGTGACTTTGATACCACCGCGAACCATCAGAGCGAAAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATg                                                                                                                                                 <  1:142242/251‑1 (MQ=255)
                                                                            ctaaaaCACTCCGCGCCTTTAATGCCCCCAGGCAGCACAATCACGTCATCTTCGCCGTCAGGCACTTCGCCCAGCGGCGCCTCCGCCATCAGCTACACGCCGCGCGTGCAGGTAATCGCCAGGTTACCCTCGCTGGCGCCGCTGGCAGTGCTGACTTTGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCACACCAGTACCGATGCGCTCATAtt                                                                                                                                       >  1:203359/3‑251 (MQ=255)
                                                                                                                        gTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCTCTACCAGGGGCGAGGCAAACCAGGGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCGGGTGTTTTcc                                                                                           <  1:85723/251‑1 (MQ=255)
                                                                                                                                                       ggcgCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTCATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATAACACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCACTTCTTTTTACCATTTCAAACAGGCGGGTGTTTTCCGGTACGGCAATCCCATGCgcccgggcgcggg                                                            >  1:186397/1‑250 (MQ=255)
                                                                                                                                                           cATCCGCCAGCAGATTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCGGGTGTTTTTCGGTACGGCAATCCCATGCGCGCGGGCGCGGCGTa                                                         >  1:172686/1‑250 (MQ=255)
                                                                                                                                                                             cgccgcGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGAATTTGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCGGGTGttt                                                                                              >  1:209059/1‑195 (MQ=255)
                                                                                                                                                                                              aTCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACGCTCCGTTCTTGTTACCATTTCAAACAGGCGGGTGTTGTCCGGTACGGCAATCCCATGCGCGCGGGCGCGGCGTAAGAGAAAACCATTGATATAGTCGATTTCAGTGTGgc                     <  1:111672/251‑1 (MQ=255)
                                                                                                                                                                                                 gCCAGGTTACCATCGCTGGCAACGCGGGCAGTGGTGACTTGGATACCACCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCgg                                                                                                    <  1:216845/169‑1 (MQ=255)
                                                                                                                                                                                                                  ggCGACGCTGGCAGTGGTGACTTTGATACCACCGCGAACCAGCAGATCGTTAGTGGGGACGGCTTCAGTCGCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCGCATATGCACTCTCCTTTCTTTGTACCATTTCAAACAGGCGGGTGGTTTCCGGGACGGCAATCCCATGCTCGTGGGGGCGGCGTAAGAGAAAACCATTGAGATAGTCGATTTCAGTGTGGCGCAGCGCGCGGATATCCTg  <  1:83422/250‑1 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                           
CGCGGCGCAAATAGCCGCGACGATACGCCCGGAACGGTGGAACTGTTTAACGGTTTCAACCAGCAGAGTGCTATCGCGAAAACACTCCGCGCCTTTAATGCCACCAGGCAGCACGATCACGTCATATTCGCCATCAGCCACTTCGACCAGCGGCGCATCCGCCAGCAGCTTCACGCCGCGCGAGCAGGTAATCGCCAGGTTACCATCGCTGGCGACGCTGGCAGTGGTGACTTTGATACCGCCGCGAACCAGCAGATCGATAGTGGTGACGGCTTCAGTCTCTTCACTACCAGGGGCGAGGCAAACCAGTGCCGATGCGCTCATATTCACTCTCCTTTCTTTTTACCATTTCAAACAGGCGGGTGTTTTCCGGTACGGCAATCCCATGCGCGCGGGCGCGGCGTAAGAGAAAACCATTGATATAGTCGATTTCAGTGTGGCGCAGCGCGCGGATATCCTG  >  NC_000913/443318‑443777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑