| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,131,281 | T→C | R88R (CGT→CGC) | flgB → | flagellar basal‑body rod protein FlgB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,131,281 | 0 | T | C | 100.0% | 10.0 / NA | 6 | R88R (CGT→CGC) | flgB | flagellar basal‑body rod protein FlgB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (5/1); total (5/1) | |||||||||||
AGTGCTGGCAGCAAACATCGCCAATGCCGATACCCCTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACCAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGC > NC_000913/1131089‑1131404 | aGTGCTGGCAGCAAACATCGCCAATGCCGATACCCCTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACTAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGCATTCCGGACCAGCCTTCGCTTGACgg > 1:74295/1‑219 (MQ=255) ccAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACTAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGCATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGc > 1:172018/1‑251 (MQ=255) cAACGTGGACGGGATGCAACTAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGCATTCCGGACCAGCCTTCGCTTGACGGTAATAcc > 1:212718/1‑138 (MQ=255) ccTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGCATTCCGGACCAGCCTTCGCTTGAAGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATCACAGCCTGCAATAc > 1:86840/1‑146 (MQ=255) cGCCTCCTACCGCAGATCTGCAATACCGCATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGa < 1:17873/67‑1 (MQ=255) cGCCTCCTACCGCAGAACTGCAATACCGCATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGa > 2:17873/1‑67 (MQ=255) | AGTGCTGGCAGCAAACATCGCCAATGCCGATACCCCTGGTTATCAGGCGCGCGATATCGATTTTGCCAGTGAACTTAAAAAAGTCATGCAACGTGGACGGGATGCAACCAGTGTGGTTGCACTGACGATGACCTCAACGCAACACATTCCGGCGCAGGCGCTGACGCCTCCTACCGCAGAACTGCAATACCGTATTCCGGACCAGCCTTCGCTTGACGGTAATACCGTCGATATGGATCGCGAACGCACCCAGTTTGCCGATAACAGCCTGCAATACCAGATGAGCCTTAGCGCGTTGAGCGGGCAAATCAAAGGC > NC_000913/1131089‑1131404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |