| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 783,318 | C→T | G51G (GGC→GGT) | pnuC → | nicotinamide riboside transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 783,318 | 0 | C | T | 90.0% | 18.6 / ‑5.9 | 10 | G51G (GGC→GGT) | pnuC | nicotinamide riboside transporter |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (5/4); total (6/4) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGAATAATAAGGCGTAACGTTACGCTTTGGGGGAAAGATGGATTTTTTT‑AGTGTGCAGAATATCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGCCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTCTGATGACGGTATTTATC > NC_000913/783129‑783546 | cGAATAATAAGGCGTAACGTTACGCTTTGGGGGAAAGATGGATTTTTTT‑AGTGTGCAGAATTTCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCAACGTCACCTTGTTTGGCAGTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGc < 1:178130/251‑1 (MQ=255) ttgtgggAAAGATGGATTTTTTTTAGTGTGCAGAATATCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCAACGTCACCTTGTTTGGCATTATTGTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGcn < 1:43508/245‑2 (MQ=255) aCCAATAGGGGAAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCGGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACATTGGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAgg < 1:192051/251‑1 (MQ=255) gCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCAACGTCACCATGTGTGGCATTATTTTCTGTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTGGCCGCGAATATTTACGGTTGGTATGCTAGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCAtt < 1:218011/232‑1 (MQ=255) cGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCACCGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTg > 1:176391/1‑251 (MQ=255) naTCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGACAAGATCAGAAACTACTTCTTTGGCCTGATCAACGTCACCTTGTTTGGCATTCTTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGTTTGCCATTGCCGAAGGCCCTCCGCTGGTTgg > 1:19291/2‑251 (MQ=255) cGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGCTACGCAACTACTTCTTTGGTCCGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGCTTAAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTATTTg > 1:122145/1‑140 (MQ=255) ncTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGTCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTc > 1:62129/2‑251 (MQ=255) cTTGCCAGTCTGGAGCAGATCAGCAACTCCTTCTTTGGTCTGATCACCGTCAACTTGTTTGGCATTATTTTCTTTCAGATCCAGCTGTATGACAGCCTGCTATTACAGGAGATTTTCTTTGCCGCGAATATTCACGGTTGGTATGCGTGGTCGCGACAAACCACTCAGAACGCGGCGGAGTTGACAATTCGCGGGCTGCCATTGCCGCAGGCACTCACCTGGTTGGCGGTTTGCGCTGTTTCGATTGGTCt > 1:144661/1‑251 (MQ=255) agaTCAGCAACTACTTCTTTGGTCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGACAGACTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGGGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTCTGATGTCGGTATTTATc > 1:75942/1‑251 (MQ=255) | CGAATAATAAGGCGTAACGTTACGCTTTGGGGGAAAGATGGATTTTTTT‑AGTGTGCAGAATATCCTGGTACATATACCAATAGGGGCAGGCGGTTATGATCTCTCATGGATCGAAGCGGTAGGCACGATCGCCGGGTTGCTGTGTATTGGCCTTGCCAGTCTGGAGAAGATCAGCAACTACTTCTTTGGCCTGATCAACGTCACCTTGTTTGGCATTATTTTCTTTCAGATTCAGCTGTATGCCAGCCTGCTATTACAGGTGTTTTTCTTTGCCGCGAATATTTACGGTTGGTATGCGTGGTCGCGACAAACCAGTCAGAACGAGGCGGAGTTGAAAATTCGCTGGTTGCCATTGCCGAAGGCACTCAGCTGGTTGGCGGTTTGCGTTGTTTCGATTGGTCTGATGACGGTATTTATC > NC_000913/783129‑783546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |