| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,380,435 | G→A | S82N (AGC→AAC) | zapG → | Z‑ring associated protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,380,435 | 0 | G | A | 92.9% | 31.5 / ‑6.4 | 14 | S82N (AGC→AAC) | zapG | Z‑ring associated protein G |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (6/7); minor base T (0/1); total (6/8) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
GGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAGCAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAA > NC_000913/3380199‑3380679 | ggAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGAGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGTACATGGCAAAAAGCTCCAAAAGCCTGCTGCCgg > 1:161933/1‑251 (MQ=255) atatGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGGATCGCGAAGAGCTGGTTAGCCTCTTTGCCCTCAGCGCTGAATTACTGGATACCATGGCGTACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAAc < 1:97713/251‑1 (MQ=255) cGTTTTGGTAATCTTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTAGCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTGTCAGCACATGGCAAAAAGGGCCAACAGCCTTCTGCCGGAGCTGTTTGCTGAAGCAGACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAg < 1:101299/251‑1 (MQ=255) aaTCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGTCAAAAAGCTCCAACAGCCTGCTGCCGTAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATc < 1:194504/250‑1 (MQ=255) cAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGTATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGAt < 1:112940/251‑1 (MQ=255) ggAAAAGAAAAAAGCTGAACTGTACGAGTATCGCGAAGAGCGGGTTAGCCACGTTGCCCGCAGCGCTGAATTACTGGATTCCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGTCAAAAATCTCCATCAGGCTGCTGCCGTAACTGTCGGCTGAAGCAAACCCGGTTCGTAATCTTTTGGCATAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGATGgcgc < 1:164146/249‑1 (MQ=255) aaGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCgg < 1:51225/251‑1 (MQ=255) gAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAATCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTAc < 1:209616/251‑1 (MQ=255) ccACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATAGACAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTACTGCCGGAACTGTCTGCTGACGCAACCCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGACAGCAACGATCAGGCACCGCTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCggg > 1:142892/1‑251 (MQ=255) ttGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGAGCAGGCACCGGTGCAGATGCCTCGCGACTACTCGGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGgcgc < 1:98741/249‑1 (MQ=255) cGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCAAACAGCCTGCTGCCGGAACTGTCTGATGAAGGAAACCCGTTCCGTGATCGACTGGCAGAGTATGAAGACAGCAACGATCCGGCACCGGTGCAGCAGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATc > 1:159998/1‑251 (MQ=255) ncTGTATCAGCACATGGCAAAAAGCTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCATAATCGTCTGGCAGAGTATGAAGCGAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGgt > 1:18450/2‑251 (MQ=255) cAAAAAGCTCCAACAGCATGCTGCCGGAACTGTCTGCTGCAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCa > 1:173433/1‑131 (MQ=255) cTCCAACAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTACTCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGACGACTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTACTCTGGTGTCTCATTGTTAGCCGTCTGaaa > 1:201235/1‑250 (MQ=255) | GGAATATGCGCTAATTGGGTTAGTCGTCGGCATCATTATTGGTGCTGTGGCCATGCGTTTTGGTAATCGTAAACTACGCCAGCAACAGGCGTTGCAGTACGAACTGGAAAAGAATAAAGCTGAACTGGACGAGTATCGCGAAGAGCTGGTTAGCCACTTTGCCCGCAGCGCGGAATTACTGGATACCATGGCGCACGACTATCGCCAGCTGTATCAGCACATGGCAAAAAGCTCCAGCAGCCTGCTGCCGGAACTGTCTGCTGAAGCAAACCCGTTCCGTAATCGTCTGGCAGAGTCTGAAGCCAGCAACGATCAGGCACCGGTGCAGATGCCTCGCGACTATTCTGAAGGCGCATCCGGCCTGCTGCGTACTGGCGCGAAGCGCGACTAATTTATTTTTCGGGCGCAGCCATTGCGCCCTCCTCTTCTCTCCCTCCCCGACTATCATTTAATCTGGTGTCTCATTGTTAGCCGTCTGAAA > NC_000913/3380199‑3380679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |