| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,335,729 | G→A | P256S (CCA→TCA) | murA ← | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,335,729 | 0 | G | A | 88.9% | 17.2 / NA | 9 | P256S (CCA→TCA) | murA | UDP‑N‑acetylglucosamine 1‑carboxyvinyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (3/5); minor base C (0/1); total (3/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTTTCGGTGATAAACCCGGTCCCTTCTGCCACCAGGTTCAACAGCGTGAACTGGGCCTGCATATCGGTCGGGAATGCCGGATGCGGCGCGGTACGTACGTTAACAGCCTTCGGACGTTTGCCATGCATATCCAGGCTAATCCAGTCTTCGCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGGCTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAGTACCGGTTTCGATACGATCCGGCAGAACGCGATAGACACCGCCGCCTAAACGTTCCACACCTTCGATGACGATACGATCGGTGCCCTGACCGCTAATTTTCGCACCCAGCGTAATCAGGAAGTTCGCGGTATCGACG > NC_000913/3335517‑3335922 | cGTTTCGGTGATAAACCCGGTCCCTTCTGCCACCAGGTTCAACAGCGTGAACTGGGCCTGCATATCGGTCGGGAATGCCGGATGCGGCGCGGTACGTACGTTAACAGCCTTCGGACGTTTGCCATGCATATCCAGGCTAATCCAGTCTTCGCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTGTGCCGCGAGAAATcn < 1:56250/251‑2 (MQ=255) ggTCCCTTCTGCCACCAGGTTCAACAGCGTGAACTGGGGCTGCATATCGGTCGGGAATGCCGGATGCGGCGCGGTACGTACGTTAACAGCCTTCGGACGTTTGCCATGCATATCCAGGCTAATCCAGTCTTCGCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGTGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAg < 1:111410/251‑1 (MQ=255) cgcgTTACGTTCGTTAAGAGCCTTCGGACGTTTTCCGTGCATATCCAGGCTAATCCAGTCTGCGCCGACTTCGATGTCCGCTCCAGCGTCGCGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGATTGCGCGATACTTCAGATAATTGTGCCGCGAGAAATCGCCGCCGCCACCAGGAAATTACCGGTTTCGATACGATGCGGCAGAGCGCGATAg < 1:182269/217‑1 (MQ=255) gCCATGCATATCCAGGCTAATCCAGTCTTCGCCGACTGCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAGTGCCGGTTTCGATACGATCCGGCATAACTCGATAGACACCGCCGCCTAGACGTTCCACACCTGCGATGACGATACGATCGGTGCCCTGACCGCTAATTTTCg < 1:214345/251‑1 (MQ=255) aaTCCAGTCTTCGCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAGTACCGGTTTCGATACGATCCGGCAGAACGCGATAGACACCGCCGCCTAAACGTTCCACACCTTCGATGACGATACGATCGGTGCCCTGACCGCTAATTTTCGCACCCAGCGTAATCAg < 1:13856/249‑1 (MQ=255) ccAGTCTTCGCCGACTTCGATGCCCGCCCCAGCGTCACGCAGTTGCGCCAGCACGGCGTCGAGAGTAGCTGCCTGCGCGTGACGGCAGATAATTTTGCCGCGAAAAATCGCCGCCGCCACCAGGAAAGTACCGGTTTCTATACGAGCCGGCAGAACGCGATAGACACCGCCACCTAATCGTGCCACACCTTCGAGGACGATACGATCGGTTCCCTGACCGCTAATTTTCGCACCCAGCGTAATCAGGAAg < 1:29842/250‑1 (MQ=255) gCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAg > 1:98564/1‑119 (MQ=255) cTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAGTACCGGTTTCGATACGATCCGGCAGAACGCGATAGACACCGCCGCCTAAACGTTCCACACCTTCGATGACGATACGATCGGTGCCCTGACCGCTAATTTTCGCACCCAGCGTAATCAGGAAGTTCGCGGTATcgacg > 1:119352/1‑251 (MQ=255) ntCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGACTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCgccgccgcc > 1:43667/2‑92 (MQ=255) | CGTTTCGGTGATAAACCCGGTCCCTTCTGCCACCAGGTTCAACAGCGTGAACTGGGCCTGCATATCGGTCGGGAATGCCGGATGCGGCGCGGTACGTACGTTAACAGCCTTCGGACGTTTGCCATGCATATCCAGGCTAATCCAGTCTTCGCCGACTTCGATGTCCGCTCCAGCGTCACGCAGTTTCGCCAGCACGGCGTCGAGAGTATCTGGCTGCGCGTTACGGCAGATAATTTTGCCGCGAGAAATCGCCGCCGCCACCAGGAAAGTACCGGTTTCGATACGATCCGGCAGAACGCGATAGACACCGCCGCCTAAACGTTCCACACCTTCGATGACGATACGATCGGTGCCCTGACCGCTAATTTTCGCACCCAGCGTAATCAGGAAGTTCGCGGTATCGACG > NC_000913/3335517‑3335922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |