| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,185,899 | C→T | S162S (TCC→TCT) | ygiL → | putative fimbrial protein YgiL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,185,899 | 0 | C | T | 100.0% | 16.9 / NA | 8 | S162S (TCC→TCT) | ygiL | putative fimbrial protein YgiL |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/4); total (4/4) | |||||||||||
CAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATC > NC_000913/3185682‑3186131 | cAAAAGCGAAGTGTACTGTCAGTACAGCAAATGCCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATGCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACGCTGGTAGTAATTACGTTCAACAATAGCAACATCTATCAGTAACTGAAGTTCAAAGCTCGTGTGGGATCTCCAATCAAAGATGCCACCCCGGGCAACGTTTAc < 1:96990/251‑1 (MQ=255) gAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCCGTCTGATCTTATGAAAAATAACAAAGAAACTGCAATAGGCGGCGCCACTGGAGTTGGCGTACGTATTATGGACAGCAAGAGCGGCGAAGTAACTTTAGGTACTCAGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCTTCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAgg > 1:161971/1‑251 (MQ=255) tctGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCGATCAGGAGCGGAATTTCAAATCTCGTATGGAATCTCCAAGCAAATATGCCACCCCGTGCATCGTCGACGCTCATGCTGACGACAAGATTGCTTACAAGTAATCGCATTTGGCCGGGTTCGcc < 1:202656/250‑1 (MQ=255) ctGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCTCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCg > 1:15487/1‑251 (MQ=255) gttggcgtACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGTAATCTCCAAGCAAAGATg < 1:172031/133‑1 (MQ=255) gAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCTCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTg > 1:18047/1‑251 (MQ=255) aCAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCTCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCATATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGcccccn < 1:40450/251‑2 (MQ=255) cAAAGCTCGTATGGAATCTCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACACGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACAAATATc > 1:202017/1‑251 (MQ=255) | CAAAAGCGAAGGTTACTTTCACTACAGCAAATACCATGACGGGTCAGTCTGATCTTCTGAAAAATACCAAAGAAACTGAAATCGGCGGCGCCACTGGCGTTGGCGTACGTATTCTGGACAGCCAGAGCGGCGAAGTAACTTTAGGTACTCCGGTAGTAATTACGTTCAACAATACCAACAGCTATCAGGAACTGAATTTCAAAGCTCGTATGGAATCCCCAAGCAAAGATGCCACCCCGGGCAACGTTTACGCTCAGGCTGACTACAAGATTGCTTACGAGTAATCGCATTTGGCCGGGTTCGCCCGGCCACATCATTAACGGATTAATGATAAGTGGATCAGATGTATAAAAAATTAAAATTAACCACAATAAGCGAATTGATTAAAAATATTTATTGTTCATTATCCGTTATTAGACTGGCCCCCTGAATCTCCAGACAACCAATATC > NC_000913/3185682‑3186131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |