| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,923,067 | G→A | L240F (CTT→TTT) | truC ← | tRNA pseudouridine(65) synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,923,067 | 0 | G | A | 100.0% | 14.5 / NA | 7 | L240F (CTT→TTT) | truC | tRNA pseudouridine(65) synthase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/2); total (5/2) | |||||||||||
CGTTGCTTTGTGGCCCTGCGCGGTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAGCAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCCGCGTGAATAGTCAGCGGCTCGCCAGTAAAAGGATGCGTCAATGACAACTGACTGGCATGTAGCATTAACCGCTGGAGGCCAAAATGCTCAGCACCGCTGCGATTCTGGCGTAAATCGCCATG > NC_000913/2922883‑2923244 | cGTTGCTTTGTGGCCCTGCGCGGTCAGAATCGCTTCCGCATCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACCAAAATCCAAATTTACGCCATACCGTTTTCTCCCTGGATTCGGAACTTATCTCTCCATCCTGACCCGCTGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAACAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCCGCGTGCATAGt > 1:88739/1‑251 (MQ=255) nnnnnncannnnnattNAATTCCCGTACATGGTGCCGACAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAACAGACcg < 2:135591/135‑1 (MQ=255) naCAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAACAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCACGCGTGAATAGTCAGCGGCTCGCCAGTAAAAGGATGCGTCAATGAAAACTGACTGGCATGTAGCATTAACCGCTGGAGGCCAAAATGCTc > 1:134506/2‑251 (MQ=255) naCCAATTTCCGCCATACCGTTTTCTCCCTGAATTAGTAACTTATCTCCCCATCCTGACCAGACGCCGCACTGAACCAAAAACTTCCATTTTAAGGAAACAGACAGCGCCACACAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCCGCGTGCATAGTCAGCGGCTCGCCAGTAAACAGAAGAGTCAATGACAactgaatagc > 1:23545/2‑205 (MQ=255) gCCATACCGTTTTCTCCCTGGATTAGNAACTTANNTCNCCATCCTGACCCGATGGCGNACNNNANNNANCCCTTNCANNTTCAGGAAANGGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCNGCGTGAATANNCAGCGGCTCGCCAGTAAAAGGNTGCNNCNNTNACAncan > 2:45473/1‑191 (MQ=255) cccTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAACAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGGCGTCCAGGCCCGCGTGAATAGTCAGCGGCTCGACAGTAAAAGGATGCGTCAATGACAACTGACTGGCATGTAGCATTAGCCGCTGGAGGCCAAAAGGCGCAGCACCGCTGCGATTCTGGCGTAAGTCGCCATg < 1:10478/250‑1 (MQ=255) ccTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAACAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCCGCGTGAATAGTCAGCGGCTCGCCAGTAAAAGGATGCGTCAATg > 1:4331/1‑170 (MQ=255) | CGTTGCTTTGTGGCCCTGCGCGGTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTTTCATTTTCAGGAAGCAGACCGCGCCAGCCAAATTGTGATAACGCCTGCATCCAGGTGTCGTCCAGGCCCGCGTGAATAGTCAGCGGCTCGCCAGTAAAAGGATGCGTCAATGACAACTGACTGGCATGTAGCATTAACCGCTGGAGGCCAAAATGCTCAGCACCGCTGCGATTCTGGCGTAAATCGCCATG > NC_000913/2922883‑2923244 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |