| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,792,772 | IS2 (–) +5 bp | intergenic (‑41/+33) | nlpC ← / ← btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1469240 | NA (NA) | 12 (1.220) | 10/318 | 0.1 | 100% | noncoding (1/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 1792772 = | 0 (0.000) | intergenic (‑41/+37) | nlpC/btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit | |||||
| * | ? | NC_000913 | = 1651548 | NA (NA) | 9 (0.900) | 8/322 | 0.1 | 100% | noncoding (706/706 nt) | IS2 | repeat region |
| ? | NC_000913 | = 1792776 | 0 (0.000) | intergenic (‑45/+33) | nlpC/btuD | NlpC/P60 family lipoprotein NlpC/vitamin B12 ABC transporter ATP binding subunit | |||||
ACCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGAC > NC_000913/1792532‑1792990 | cgccagagaaataactggctggctgctacacaatgttgccgggcaacgagtgagacagtcctcaccggttccaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctcaggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGcgtc > 1:146021‑M2/241‑245 (MQ=255) gagaaataactggctggctgctacaccatgttgccgagcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatcggttctccaatgactagtctaaaaactagtagtaatactatcacgtatttaagtgagattggttgtctggagattcagggggccagtctaGCGTCGTAATTAccc < 1:146547‑M2/15‑1 (MQ=255) gctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATg > 1:6419‑M2/217‑250 (MQ=255) ccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATc > 1:16625‑M2/211‑249 (MQ=255) gcgTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagac < 1:109311‑M2/239‑26 (MQ=255) ttgccgggcaacgagggagaccgacatccccggttcaacgctctgctgaccaatttcgttcttttcatgtgtggtccgccgtctgcctttctccggccctaagacatcactaatctgttctctaatgactagtctaaaaactagtattaagactatcacttatttacctgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCCAGATACTAATGAAATCAGATGGt > 1:91138‑M2/206‑251 (MQ=255) aacgagggagaccgtcatccccggttcaaagctctgctgaacaattgctatcttttcctttgtggtacgccgtctgcgtttctccggccctaagacatcaatcatcttttctccaatgactagtctaaaaactagtattaatactatcacttatttaagtgatattggttgtctggagatgcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTCATGAAATCAGCTGGTCGACATCAg < 1:164248‑M2/55‑1 (MQ=255) ngagggagaccgtcatccccggttcaaagctatgctgcacacttgcgatcttttcctgtgtggtacgccgtctgcgtttttccggccctaagacatcaatcatctgttctccaatgactagtctaaaacctagtattaagactctcacttatttaagtgatattggttgtctggagattcagggggccagtctagcgtcgtc > 1:25963‑M2/195‑201 (MQ=255) ncgtcatccccggttcaaagctctgctgcacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCtgt > 1:56056‑M2/186‑248 (MQ=255) cttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcactcatctgttctccaatgactagtctaaaaactagtattaagactataacttatttaagggatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGaaa > 1:96415‑M2/146‑196 (MQ=255) cAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCCGAAGCAGTGATGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat < 1:209303‑M2/251‑119 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAg > 1:178914‑M2/121‑175 (MQ=255) cTGGCATTTGGCGGAGGAGCTTTATGGGGGCTACACCCGGCCCGAAGCAGAGCGGTGATCAAAATACGGCAGAAACGCATTCCGTACGGGTCCTCTGTTTTTTATTCTTGCATTTATTTAGCGTCtggatttgcccctatatttccagacatatgttttcacttaacccattaccagcccgctgccgcagagattcccggggcgagcgataaccccgcggactatgcgggtgcccttcgttataatgctcg < 1:170387‑M2/251‑127 (MQ=255) cctaagacatcaatcatctgatctccaatgactagtctaaaaactagtcttaagactatgacttctttcagtgatattggatgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTAAAGATACTAATGAAATCAGATGGTCGAAATc > 1:144449‑M2/109‑161 (MQ=255) gtggCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAAAGCATTACGTACGGATACTCTGTTTTTTATTCTTGCATTAATTTAGAGTCtggctttgcccctatctttccagacatctgttatctcttaacccattacaagcccgctgccgcagatcttcccgtggcgagcgataacccagc < 1:162398‑M2/192‑94 (MQ=255) naagCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTCCGGTTCATCTGTTTTTTATTCTTGCATTAATTTAGCGTAtggatttgcccctctatttcaagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg < 1:38985‑M2/160‑80 (MQ=255) aTCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgccgccgcagatatgcccgtggcgagcgataacccagcgcac > 1:64077‑M2/1‑68 (MQ=255) cAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTTTGTTCTTTATTCTTGCATTAATTTAGCGTAtgggtttacacctatatttccagacatctgttatcacttaacatattaccagcccgctgccgcagatattcccgtggcgtgcgataacccagcgcactctgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgat < 1:137723‑M2/251‑186 (MQ=255) gactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCCGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACg > 1:198829‑M2/56‑251 (MQ=255) gCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacg > 1:97083‑M2/1‑57 (MQ=255) aTTAATTTAGCGTCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccttctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagc > 1:106721‑M2/1‑14 (MQ=255) | ACCACAAATCCCGAACAGTCCACACCGCGCCGCGTCATGCCACCATAACGATACGGCGTGCCATGCCAGCTTTGTAGCTGGTCGTTCAAACCGGCAATAACGGTAATCGAATCAGAAAGTCTGGCATTTGGCGGCGGTGCTTTATGGTGGCTACACCCGGCCAGAAGCAGTGCTGTGATCAAAATAAGGCAGAAACGCATTCCGTACGGTTCCTCTGTTTTTTATTCTTGCATTAATTTAGCGTCGTAATTACCCGATTTTCAAGATACTAATGAAATCAGATGGTCGAAATCAGCATTCTGTGACCTTCGATATCCAGACGGCGAAAATTCATCCCATAGGCCTGCGCCAGATTTGGCGGCGTGAGCACCTCTTCCCTGCGTCCACTGGCCAGCATTTTTCCACCTTTTAGCAACCACGCCCGATGCGCATGACGCAATGTGTGGTTGAGATCGTGAC > NC_000913/1792532‑1792990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |