| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,303,073 | Δ12 bp | coding (175‑186/921 nt) | oppB → | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1303073 | 1303084 | 12 | 11 [0] | [0] 11 | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1303072 | 0 (0.000) | 11 (1.110) | 9/320 | 0.1 | 100% | coding (174/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB |
| ? | NC_000913 | 1303085 = | 0 (0.000) | coding (187/921 nt) | oppB | murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB | |||||
AAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTG > NC_000913/1302888‑1303253 | ggcacaggccagaaggtagggcaatgttaaaatttattctacgtcgctgtctggaagcgattccgacgctatttattcttattactatttcgttctttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGGGATTTCGGTCCATCGTTTaa > 1:4075‑M2/198‑250 (MQ=255) gcaatgttaaaatttattctacgtcgctgtctggaagagattccgacgctatttattcttattactatttcgttatttatgatgcgcctcgcgccgggcagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatttcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCa > 1:96352‑M2/178‑250 (MQ=255) aagcgattccgacgctatttattcttattactatttcgttcgttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttgccgccagaagtgagggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCtan < 1:42740‑M2/12‑2 (MQ=255) tcgttctttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttaccgccagtagtgatggccaagatcgaagcgaaaaatcatcgtaatgacccgTATTTCAGCTTCCTGAAACAACGGGTGCACTGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTg < 1:33366‑M2/81‑1 (MQ=255) nttctttatgatgcgcctcgcgccgggaagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATAc > 1:128817‑M2/107‑251 (MQ=255) ccgggaagccctttttccggcgaacgtactttaccgccagaagggatggccaatatcaaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGAGTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTTCATCCAGTTTGCCCGTTTCTGc < 1:186711‑M2/107‑1 (MQ=255) gggaagcccttttaccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTg > 1:208624‑M2/83‑251 (MQ=255) nnnnnnnnnngtnnnnnaccnccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTg < 2:135630‑M2/85‑1 (MQ=255) ccggcgaacgtactttaccgccagaagtgatggccaatatcgaagcgaaatatcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGAc > 1:193365‑M2/69‑146 (MQ=255) tcgaagcgaaataacatcttaatgatccgTATTTCAGCTACCGGAAACAACTGGCGCACGGTTATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGTATCCAGTTTTCCCGTTTCTGCCAAACTGGGTGCCGCAGCATTTTTCCTTGCGGTAATACTGGgtg < 1:79809‑M2/151‑1 (MQ=255) tcatcttaatgatccgTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATTTCTTGGTTGCATCCAGTTTTCCCGTTTCTGcc < 1:75249‑M2/108‑1 (MQ=255) | AAGGTAGGGCAATGTTAAAATTTATTCTACGTCGCTGTCTGGAAGCGATTCCGACGCTATTTATTCTTATTACTATTTCGTTCTTTATGATGCGCCTCGCGCCGGGAAGCCCTTTTACCGGCGAACGTACTTTACCGCCAGAAGTGATGGCCAATATCGAAGCGAAATATCATCTTAATGATCCGATCATGACACAGTATTTCAGCTACCTGAAACAACTGGCGCACGGTGATTTCGGTCCATCGTTTAAATATAAAGATTATTCGGTCAATGACTTGGTTGCATCCAGTTTTCCCGTTTCTGCCAAACTGGGAGCCGCAGCATTTTTCCTTGCGGTAATACTGGGTGTTAGTGCTGGCGTTATTG > NC_000913/1302888‑1303253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |