| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,146,389 | (T)6→7 | coding (132/879 nt) | pflC → | putative pyruvate formate‑lyase 2 activating enzyme PflC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,146,389 | 1 | . | T | 100.0% | 26.5 / NA | 11 | F44? (TTT→TTN) | pflC | putative pyruvate formate‑lyase 2 activating enzyme PflC |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (6/5); total (6/5) | |||||||||||
GTTGCGGGAAGCGCAACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTT‑AAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGTGATGAAAGATGACATTTTCTTTCGCACGT > NC_000913/4146157‑4146606 | gTTGCGAGAAGCGACACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCAGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATAAGCTGTAACGTTGTGGAACCGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCt > 1:157311/1‑251 (MQ=255) gcCCACAAGATTATGCCGGCCTGGTGGGGCGAGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGACGGAGATCCAGGCTGCCATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATc > 1:168355/1‑251 (MQ=255) gggCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTAGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGc < 1:218196/251‑1 (MQ=255) ggtgCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGGCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATcc < 1:77023/250‑1 (MQ=255) ccGGATACAGCGACTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGc > 1:28035/1‑250 (MQ=255) ggtgtgGAAACGGGCCGCGATGATGTGGGGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTCCGGTGGGCTTTTTTTAAAGACTGTCAGCATCTTTGCCCGTGGTGTGCTAATNCGGNNNNNAtnnnnnn > 2:134292/3‑144 (MQ=255) gcgcCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACGGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGc < 1:116707/251‑1 (MQ=255) cgccgcGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGcn < 1:127733/251‑2 (MQ=255) cgccgcGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGGCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATTCTGATGAATTCCCCTCCGGTGCGTTTGAACGGATTGGTCGCGATATCAGcc < 1:82224/251‑1 (MQ=255) gACGGCGAGGGCATTCGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGCCCGTGGTGAGCTACTCCGGCGTCGCTCTCAGGCAAAATCCAGACGGTACGCCGAGAGGCGAAATGTCTGCACTGTGCGAACTGTTTGCGAGATGCGGATGAATGCCCCCCCGGGGCGTTTGAACGGATTGGTCGCGATATCCGCCTTGCCGCTCTGGAACGGGCAGTGATGACAGATGACCTTTTCTTTCGCACGt > 1:150581/1‑251 (MQ=255) cGTACGGTGGTCTTTTTTTAAAGGCTGTCCGCATCTTTGAACGTGGTGTGCTAATCCGGAGTCGATCTCCGACAAAATCCAGACGGTACCCAGCGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGCTGAATGCCCCTCCGGGGCGTTTGAACGGCTTGGTCGCGATATCAGCCTTGACGCTCTgg > 1:140490/1‑197 (MQ=255) | GTTGCGGGAAGCGCAACAGCGCCCACAAGATTATGCCGGGCTGGTGGTGCGCGTTGCCGGATACAGCGCCTTCTTTGTCGAACTGTCGAAGGAGATCCAGGATGACATCATCCGCCGGACAGCGCATCAGCTGTAACGTTGTGGAAACGCGCCGCGATGATGTGGCGCGCATTTTCAACATTCAGCGTTATTCACTGAATGACGGCGAGGGCATTCGTACGGTGGTCTTTTTT‑AAAGGCTGTCCGCATCTTTGCCCGTGGTGTGCTAATCCGGAGTCGATCTCCGGCAAAATCCAGACGGTACGCAGAGAGGCGAAATGTCTGCACTGTGCGAAATGTTTGCGTGATGCGGATGAATGCCCCTCCGGGGCGTTTGAACGGATTGGTCGCGATATCAGCCTTGACGCTCTGGAACGGGAAGTGATGAAAGATGACATTTTCTTTCGCACGT > NC_000913/4146157‑4146606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |