Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,753,839 C→T intergenic (‑9/+12) ydhV ← / ← ydhY putative oxidoreductase YdhV/putative 4Fe‑4S ferredoxin‑like protein YdhY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,753,8390CT100.0% 24.3 / NA 11intergenic (‑9/+12)ydhV/ydhYputative oxidoreductase YdhV/putative 4Fe‑4S ferredoxin‑like protein YdhY
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (3/8);  total (3/8)

CCAGTTAATGGGCCGGTAGCAAAGACTAATTTATTCGCTTCATCGAAAGGTTTCGTGCCTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTACAGCCAATACAGCGTTTATGATCGACGGTAATACAGCCTTCTTTCTGCTGCCAGGTAATCGCACC  >  NC_000913/1753631‑1754066
                                                                                                                                                                                                                |                                                                                                                                                                                                                                   
ccAGTTAATGGGCCGGTAGCAAAGACTAATTTATTCGCTTCATCGAAAGGTTTCGTGCCTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATAGATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTcac                                                                                                                                                                                                                      <  1:211377/224‑1 (MQ=255)
                 aGCAAAGACTAATTTATTCGCTTCATCGAAATGTTTCGTGCCTTGCGGTACTTCGACATAGATAATTTGGGAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGTAATCTGCGAGGGTAATATTTCCTGGCGTGATGTTGACTCTTAATATATTACGTTTCCACCCGTTAGCCAGGATGTTTTTCTTTGCAATATTCACACAGAAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTg                                                                                                                                                                           <  1:131331/250‑1 (MQ=255)
                                                                         catacataATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCg                                                                                                                   <  1:45879/250‑1 (MQ=255)
                                                                                                          cGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTc                                                                                                                                     <  1:212834/199‑1 (MQ=255)
                                                                                                                          cTTACTGGAATCTTCGAGGGTAATATTTCCTGACGTGAGCTTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGTACGATTCACACAGTAATATCTTTCCACTCGATAATTTTTCACGCCACTGTTGGGCAGGAGTTTGCGCATTCCCCGCATAACACACATTTCGCGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTAc                                                                  >  1:10818/1‑250 (MQ=255)
                                                                                                                          cTTACTGGAATCGTCGAGGGTAATATTTCCTGTCGTGAGAGTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCa                                                                                                                                                                                                                              <  1:331132/94‑1 (MQ=255)
                                                                                                                                             gTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTNNTATCTTNnc                                                                                                                                                                                                      >  2:25166/1‑99 (MQ=255)
                                                                                                                                             gTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTCACGCCCCTGTTGGGCAGGCGTTTGCGCAt                                                                                                                                                          <  1:25166/143‑1 (MQ=255)
                                                                                                                                               aaTATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTACAGCCAATACAGCGTTTATGATc                                            <  1:16210/251‑1 (MQ=255)
                                                                                                                                                                                          cAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCTTTCCTCTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTACAGCCAATACAGCGTTTATGATCGACGGTAATACAGCCTTCTTTCTGCTGCCa              <  1:117652/238‑1 (MQ=255)
                                                                                                                                                                                          cAACCGTTAGCCATGATTTTTTTCTTTGCAAGATTCACACAGTAATATCATCCAACTCGATAATATTCAACACCCCTGTCGGGCAGGCGTTTGCGCATTACCCGCATAACACACATCTCGAGGCTTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTACAGCCAATACAGCGTTTATGATCGACGGTAATACAGCCTTCTTTCTGCTGCCAGGTAATCGCAcc  >  1:177859/1‑250 (MQ=255)
                                                                                                                                                                                                                |                                                                                                                                                                                                                                   
CCAGTTAATGGGCCGGTAGCAAAGACTAATTTATTCGCTTCATCGAAAGGTTTCGTGCCTGGCGGTACTTCGTCATACATAATTTTGTAGCCGAAGCCCATGCCACCGACAAAACTTTTAAACTTACTGGAATCTTCGAGGGTAATATTTCCTGTCGTGAGATTGACTCTTAATATATTACCTGTCCAACCGTTAGCCATGATTTTTTCCTTTGCAAGATTCACACAGTAATATCTTTCCACTCGATAATTTTTAACGCCCCTGTTGGGCAGGCGTTTGCGCATTCACCGCATAACACACATTTCGAGGATTTTTTACTTTCGGTATTTACGGTGGCCATCATCCACGGGCATGCCGTAGTACAGGCGCTACAGCCAATACAGCGTTTATGATCGACGGTAATACAGCCTTCTTTCTGCTGCCAGGTAATCGCACC  >  NC_000913/1753631‑1754066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑