| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,669,453 | G→A | A47V (GCC→GTC) | ynfL ← | putative DNA‑binding transcriptional regulator YnfL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,669,453 | 0 | G | A | 100.0% | 24.5 / NA | 10 | A47V (GCC→GTC) | ynfL | putative DNA‑binding transcriptional regulator YnfL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (6/4); total (6/4) | |||||||||||
GCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGGCACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTG‑AGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTT > NC_000913/1669285‑1669684 | gCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCATGATGCAGCCTTTCAGCGCGAGCAGCAGCGTCATCCACCATAGGCAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCATGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGAGAAAAATTCAGGCgggaaacggagccgcccc > 1:238808/1‑235 (MQ=255) tCCCCCGCTTCACCCTGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATttg < 1:74595/152‑1 (MQ=255) tCCCCCGCTTCACCCTGATGCAGCCTNTCAGCGNNAGNGGCAGCGTCATCCACCATANACNNNANNNGNCGACTNTCNNCAAGAAACTNTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGANACCAATttg > 2:74595/1‑152 (MQ=255) cccGCTTCACCCTGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGCAACTGTTTTCCTGCTGCCGTCAGCCATCCAATGCGATTGGTTAGTGCCAGCAGTCGGACACCCATttgtt > 1:177944/1‑151 (MQ=255) agtggtgctcttccgatctcgcgAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGCCTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGAtn < 1:203350/232‑2 (MQ=255) cgcgAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATTTGTTGCTCCAGCGCNTGANNnnnctnnnnnn > 2:203350/1‑144 (MQ=255) accaTAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGTAGTCGGACACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTg‑ag < 1:311325/251‑1 (MQ=255) tgctgcCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATTGGGTGCTCCAGCGCATGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAgcggc < 1:146534/120‑1 (MQ=255) nacTGCGATTGGTTCGTGCCAGCAGTCGGACACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCACAAGCAACAAAATAACGCCGATGACGAAGGTTAATATTCATATTTAAAACATCTTTTTTGTAGAT‑ATTAATATATTAAAAAGAAAAATTCGATTTTTCTACCCtctgagaaagggaaagcac > 1:85203/2‑232 (MQ=255) ggTTCGTGCCAGCAGTCGGACACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGGTTCGAAAAATTTCGGCGGGGCGCGGCGCGCCCGGAAAGCAGCTCTTCCGCCACAACAAAAAAGGAAAGCCGATGACGAAGTTTAAAATTTATATTTAAAAAAAACTATTTT‑AGATTTTTAATATATTAAACAGAAAAAATCGATTTTTCTACCCCTTTTATAAACCTGATCTACAGGCATAttt > 1:118742/1‑251 (MQ=255) | GCCGACGAAGTAAAACCAATGCGCAACTCCCCCGCTTCACCCTGATGCAGCCTTTCAGCGCGAGCGGCAGCGTCATCCACCATAGACAGGATTTGCCGACTATCTGCAAGAAACTGTTTTCCTGCTGCCGTCAGCAATACACTGCGATTGGTTCGTGCCAGCAGTCGGGCACCAATTTGTTGCTCCAGCGCCTGAATCTGCTGACTTAGCGGCGGTTGCGAAATATTCAGGCGGGCAGCGGCGCGCCCGAAATGCAGCTCTTCCGCAACAGCAACAAAGTAACGCAGATGACGAAGTTCAATATTCATATTTAAAACATCTTATTTG‑AGATTATTAATATATTAGACAGAACAATTCGATTTTCCTACCCTATGTATAAGCCTGATCTACAGGCATATTT > NC_000913/1669285‑1669684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |