| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,408,820 | G→A | Q257Q (CAG→CAA) | zntB → | Zn(2(+)):H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,408,820 | 0 | G | A | 93.3% | 35.1 / NA | 15 | Q257Q (CAG→CAA) | zntB | Zn(2(+)):H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (8/6); minor base C (1/0); total (9/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
CTGCTGCGCAAACAATTAATTGTGATGCGTCGCTATATGGCACCGCAACGTGATGTTTATGCTCGTCTTGCCAGTGAACGTTTGCCGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCATCGTAGTAAATGGTTGTAACAAAAGCAATTTT > NC_000913/1408614‑1409046 | ntgctgcGCAAACAATTAATTGTGATGCGTCGCTATATGGCACCGCAACGTGATGTTTATGCTCGTCTTGCCAGTGAACGTTTGCCGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGtt > 1:263077/2‑251 (MQ=255) ccGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTTGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGAATGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCt > 1:280665/1‑181 (MQ=255) gCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGGCTTGGGCGCGGCCTTGACGAAATCGACGCCTGGATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAAGTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATgg < 1:43295/168‑1 (MQ=255) aCGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCAAGGACTGGCGTGATGGCGGATGCAATCGCTCCAGTGATGCAGGAAACTTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTAACCCGTACCTTTc > 1:157195/1‑179 (MQ=255) tCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGTTGGAGGCTGAAATAGCTCACGTAATGCCGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGAAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGGTATTTTGCGTCCACCTTGGTGGGATCCCTGGCCGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTATGTTAGTTGTTCTTATtggtg > 1:292125/1‑251 (MQ=255) gCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGAtttt < 1:4543/213‑1 (MQ=255) cgcgGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCCATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCttt > 1:163781/1‑251 (MQ=255) cgaccTTGACGAAATCGACGCCTGTATAGCACGGACTTGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCtcgtt < 1:295303/86‑2 (MQ=255) nccTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGACGAAATCGCTCAAGCGTTGCAGGAAACTTTAGCACGTCGTCCCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATgg > 1:58334/2‑251 (MQ=255) ccTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTtggt > 1:2676/1‑166 (MQ=255) aaaTCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTCCCTTTCTGACCGGGTTATTTGGCGTCATCCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGTTTTATGGTTGCATCgt < 1:221716/251‑1 (MQ=255) ggCGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGAttttn < 1:84279/167‑2 (MQ=255) cGTGATGGCGGATGAAATCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCATCGTAGTAAATGGTTGTAACAAAAGCAAtttt > 1:118137/1‑251 (MQ=255) aaaTCGCTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCCATGGTCTTTTTACCCAGTACATTTATGACCGAGTTCTTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGCTTTTCAATTTTTTGTATTCTGTTCGTTGTTCTTa > 1:281016/1‑180 (MQ=255) cTCAAGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGtt < 1:251392/185‑1 (MQ=255) | CTGCTGCGCAAACAATTAATTGTGATGCGTCGCTATATGGCACCGCAACGTGATGTTTATGCTCGTCTTGCCAGTGAACGTTTGCCGTGGATGAGCGATGACCAACGCCGTCGGATGCAGGATATTGCCGATCGCCTTGGGCGCGGCCTTGACGAAATCGACGCCTGTATAGCACGGACTGGCGTGATGGCGGATGAAATCGCTCAGGTGATGCAGGAAAATTTAGCTCGTCGTACCTATACAATGTCGTTGATGGCAATGGTCTTTTTACCCAGTACCTTTCTGACCGGGTTATTTGGCGTCAACCTTGGTGGGATCCCTGGCGGCGGGTGGCAATTCGGATTTTCAATTTTTTGTATTCTGTTAGTTGTTCTTATTGGTGGTGTTGCTTTATGGTTGCATCGTAGTAAATGGTTGTAACAAAAGCAATTTT > NC_000913/1408614‑1409046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |