| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,411,260 | C→T | intergenic (+9/‑42) | yjfJ → / → yjfK | PspA family protein YjfJ/DUF2491 domain‑containing protein YjfK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,411,260 | 0 | C | T | 100.0% | 61.3 / NA | 22 | intergenic (+9/‑42) | yjfJ/yjfK | PspA family protein YjfJ/DUF2491 domain‑containing protein YjfK |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (13/9); total (13/9) | |||||||||||
CCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGCCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAG > NC_000913/4411028‑4411501 | ccGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATACTTAAAACGACTGCAAACGCGTCAGGCCGAACGTAAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCACGACCTTGACGCAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTTTCAGCCTCGCTCAACGGCt > 1:280866/1‑251 (MQ=255) ntCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGGAGCAATAAAAGTAGCGACCAGGATGTTTTAGCAAGACTGCAACGCCCACAGGGCGAGTAATTTTTTTTTCAGCCTCGCTAAAAGGGTGGCAACTATTTTAAGGATaaa > 1:193963/2‑250 (MQ=255) ccTTAACACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCCACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTcc > 1:108316/1‑251 (MQ=255) aaaCGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGCGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCCGCGt > 1:141616/1‑251 (MQ=255) aaCGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGTAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAAGTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCATCCGCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTc < 1:70415/220‑1 (MQ=255) ncGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAGGACGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCCCCCAGGATGTATTAGCAAGACTGCAAAGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGGATGTTTGGCAAGGATAATAAGCCAGc > 1:28402/2‑251 (MQ=255) gcCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTggg < 1:143386/250‑1 (MQ=255) aGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTGTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGTATAAAATATTTCTGGTTTTTTCCAGCGTCTGTTGGGCAAGGATAATAAGCCAGCTATCGCTCGTGTTCCGCTGGGACTTCAtc < 1:206939/251‑1 (MQ=255) gTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGc < 1:245105/142‑1 (MQ=255) gcgACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGCCGCAATAACAGAAGCGCCTAGGATGTATTAGCCAGACTGCCACGCCCACAGGGCGAGTAATTTTTTTGTCCGCCTCGCTCCAAGGCTGGCAACTATTTTACGGATAAACTATGTCTGGTTTTTTCCAGCGTCTGTTTGGCCAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCCTCTCAATAGTGGCTTTACGCTCGac > 1:213607/1‑250 (MQ=255) ngAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAACAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATACGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCCATAGTGGCTTTACGCTCGACACGTTAGcgtt > 1:96961/2‑251 (MQ=255) ggCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCCGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGac > 1:182878/1‑231 (MQ=255) ggCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTGTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGGTTTTTCCAGCGGCTGTTTGGCAAGGATAATAAGCCAGCTATCGCGCGTGGTCCGCTGGTACTTCATCTCAATAGTGGCTTTACGCGCGACACGTTAGCGTTTCGTTTg < 1:143022/249‑1 (MQ=255) ggAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATTTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTgg < 1:171446/108‑1 (MQ=255) cNATAAAAGTAGCGCACAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCt > 1:253911/1‑251 (MQ=255) cAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCt > 1:251736/1‑251 (MQ=255) nnnnnnnnnngANNNNNTAGNAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTc < 2:193963/144‑1 (MQ=255) cgcCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCg > 1:12147/1‑148 (MQ=255) gcCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGCTAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGa > 1:266787/1‑250 (MQ=255) cccAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATNAGCNNNNNAtnnnnnnnnnn > 2:198567/1‑144 (MQ=255) gCAACGCCAACAGGGCGAGTAATTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGGTTGTCAAGGATAATAAGCCAGCTATCGCTCGTGGGCCGCTGAGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGAGGAATTGCTTATTGCGCt < 1:251183/215‑1 (MQ=255) aTTTTTTTGTCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGGGGTCCGCTGGTACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCGGGAAAATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAg < 1:177499/251‑1 (MQ=255) | CCGTTGGCGCATCTTCCAGCGTTTCGACAGCGGCAGAATCCTTAAAACGCCTGCAAACGCGTCAGGCCGAACGTCAGGCTCGCCTGGATGCTGCCGCACAGTTGGAGAAAGTCGCAGACGGTCGCGACCTTGACGAAAAGCTGGCGGAAGCCGGAATTGGCGGTAGCAATAAAAGTAGCGCCCAGGATGTATTAGCAAGACTGCAACGCCAACAGGGCGAGTAATTTTTTTGCCAGCCTCGCTAAAAGGCTGGCAACTATTTTAAGGATAAAATATGTCTGGTTTTTTCCAGCGTCTGTTTGGCAAGGATAATAAGCCAGCTATCGCTCGTGGTCCGCTGGGACTTCATCTCAATAGTGGCTTTACGCTCGACACGTTAGCGTTTCGTTTGCTGGAAGATGAATTGCTGATTGCGCTGCCGGGTGAGGAATTTACGGTAGCCGCCGTCAGCCACATCGATCTGGGCGGCGGTAG > NC_000913/4411028‑4411501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |