| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,397,180 | C→T | R372R (CGC→CGT) | amiB → | N‑acetylmuramoyl‑L‑alanine amidase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,397,180 | 0 | C | T | 100.0% | 49.1 / NA | 18 | R372R (CGC→CGT) | amiB | N‑acetylmuramoyl‑L‑alanine amidase B |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/10); total (8/10) | |||||||||||
GATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGCTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTG > NC_000913/4397004‑4397411 | gATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGCCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCAGCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGgcgan < 1:59177/251‑2 (MQ=255) agtcagtcTGACCCCTATTTCAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGGATGATGTTGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGAGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTAt > 1:268689/1‑203 (MQ=255) gtcagtcTGACCCCTATTTAAGCCAGGCGGTGCTGGAATTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTgg < 1:318402/186‑1 (MQ=255) tGGAATTACAGTACGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGATGCAACGCATTGGCGAAAGACATAAACGACGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGGTTGCTGgcgan < 1:79317/202‑2 (MQ=255) ggATTTAAAGTTCGGTCATTCCCAGCGGGAAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAAAGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGTCATTTACAAAGGCCTgcgc > 1:93381/1‑250 (MQ=255) cGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCCGTTGCAACGCATTGGCGCAATACATAACCGTCGACCCGAACACGCCAGCCTTGTCGTTCTCCGTTCGCCGGa > 1:53603/1‑123 (MQ=255) cGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCttn < 1:201182/251‑2 (MQ=255) ggtagggtaTGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGGCGACCATAACACGCCAGCCTGGGCTTGCTGCTTTCGCCGGATATCCCAGCAGGACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGgcgag < 1:54624/174‑1 (MQ=255) gggtaTGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCGTGCGCGTTCGATGCAATCTgc < 1:91367/251‑1 (MQ=255) gatgTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGGCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACGTCCTTGCGCATCCGATGCAATCTGCGCCGCa < 1:287262/251‑1 (MQ=255) gtcagtTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTgtc < 1:10168/251‑3 (MQ=255) gCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACgg < 1:107107/251‑1 (MQ=255) cGAAATACATAAACGTCGACCAGAACACGCCAGCCTTAGCGTTCTGCGTTCGCCGGATATCCAACCAGTAATGGTCGAAACCGGTTTTa > 1:306718/1‑89 (MQ=255) aCATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACAGATTTTATCAGCAACAACAGCGAAGAACGATTGCTGGCGAGCGACGATTAACAACAACAGCTGGCAGAAGCAATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATATGCGCAGCAGGGTGCAACGGCACAAACTGCCAGTAAGGTgacgac > 1:245671/1‑240 (MQ=255) tAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATc < 1:289982/182‑1 (MQ=255) cGACCAGAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACACCAGAGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGAAGACGCCATTTACAAAGGCATGCGCAATTACTTCCTTGCGCATCCGATGCAATATGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCaa > 1:226597/1‑250 (MQ=255) gAACACGCCAGCCTTGGCGTTCTGCGTTCGCCGGATATACAATCAGTACTGGTCGAAACCGGttt > 1:144729/1‑65 (MQ=255) ccAGCCTTGGCGTTCTGCGTTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTCTCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAAATGCCAGTACGGTGACGACGGCAGATCGCACGCCGCCAAACTCAGGACGATTg > 1:282215/1‑251 (MQ=255) | GATGTGCTGGCGAACAGTCAGTCTGACCCCTATTTAAGCCAGGCGGTGCTGGATTTACAGTTCGGTCATTCCCAGCGGGTAGGGTATGATGTAGCGACCAGTATGATCAGTCAGTTGCAACGCATTGGCGAAATACATAAACGTCGACCAGAACACGCCAGCCTTGGCGTTCTGCGCTCGCCGGATATCCCATCAGTACTGGTCGAAACCGGTTTTATCAGCAACAACAGCGAAGAACGTTTGCTGGCGAGCGACGATTACCAACAACAGCTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTG > NC_000913/4397004‑4397411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |