| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,381,966 | C→T | G118D (GGC→GAC) | frdA ← | fumarate reductase flavoprotein subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,381,966 | 0 | C | T | 100.0% | 16.2 / NA | 7 | G118D (GGC→GAC) | frdA | fumarate reductase flavoprotein subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (3/4); total (3/4) | |||||||||||
GTTAGCACGGATCTGCACCAGCGTGCCTTCCATCATGTTCATTGCTACCAGGCCGCGAACATGACCATCATCAACCAGAATATCCAGCACGAAATGTTCGTCAAAACGCTGGATCTGCGGGAATTGCAGAGAGGTCTGGAACAGCGTGTGCAGCATATGGAAGCCGGTCTTATCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGCCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTCCAGTTGGGTCATTTCGGTTGGGCAGTGGTGGACGAAATAATCCACGACATCCTGCTCACACAACCAGTCGCCACCCGCTACTGTATCGTGAAAGTGATATTCGAAGCTGTCATGATCCTGCGCGACAGCGGCGGAGCC > NC_000913/4381758‑4382165 | gTTAGCACGGATCTGCACCAGCGTGCCTTCCATCATGTTCATTGCTACCAGGCCGCGAACATGACCATCATCAACCAGAAAATACAGCACGAAATCTTCGCCAAAACGCTGGATCTGCGGGAATTGCCGAGAGGTCTGGAACAGCGTGCGCAGCATATGGAAGCCGGTCTTACCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGTCGAAGCGACGAAAGTTGACGCTACCATCCGGGCGACGGCTcc > 1:325031/1‑251 (MQ=255) aTTGCTACCAGGCCGCGAACATGACCATCATCAACCAGAATATCCAGCACGAAATGTTCGTCAAAACGCTGGATCTGCGGGAATTGCAGAGAGGTCTGGAACAGCGTGTGCAGCATATGGAAGCCGGTCTTATCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGTCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTCCAGTTGGGTCATTTCGGTTgg < 1:134386/251‑1 (MQ=255) cAGGCCGCGAACATGACCATCATCAACCAGAATATCCAGCACGAAATGTTCGTCAAAACGCTGGATCTGCGGGAATTGCAGAGAGGTCTGGAACAGCGTGTGCAGCATATGGAAGCCGGTCTTATCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGTCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTCCAGTTGGGTCATTTCgg < 1:207376/239‑1 (MQ=255) tatCCAGCACGAAATGTTCGTCAAAACGCTGGATCTGCGGGAAGTGCAGAGAGGTCTGGAACAGCGTGTGCAGCATAGGGAAGCCGGTCTTATCGGCGGCGGACCAGGTGCGCTCGATTTTCATGGCGTCGAAGGGACGTACGTTGGCGCTACCAGCCGTGCTGCGGGTCCTTGGGCATCCCCACAGTTCCAGTTGGGTCATTTCGGTTGGGCAgtggtg < 1:307544/220‑1 (MQ=255) ggAAGCCGGTCTTATCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGTCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTCCAGTTGGGTCATTTCGGTTGGGCAGTGGTGGACGAAATAATCCACGACATCCTGCTCACACAACCAGTCGCCACCCGCTACTGTATCGTGAAAGTGATATTCGAAGCTGTCATGATCCTGCGCGACAGCGGCGGAGcc < 1:11262/250‑1 (MQ=255) gtcggcgAACCAGGTGCGCTCGATTTTCATGCCGTCGAAGAGACGTACGTTGCCGCTACCATCCGGGCGACGGCTCCCTGGGCATCCCCCAAGTTCCAGTTGGGACCTTTAGGTTGGGCAGTGGTGGACGAAATAATCCACGAcctcct > 1:314677/3‑149 (MQ=255) aaCCAGGTGCGCTCGATTTTCATGCCGTCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTNNAGTTGGNNc > 2:14966/1‑99 (MQ=255) | GTTAGCACGGATCTGCACCAGCGTGCCTTCCATCATGTTCATTGCTACCAGGCCGCGAACATGACCATCATCAACCAGAATATCCAGCACGAAATGTTCGTCAAAACGCTGGATCTGCGGGAATTGCAGAGAGGTCTGGAACAGCGTGTGCAGCATATGGAAGCCGGTCTTATCGGCGGCGAACCAGGTGCGCTCGATTTTCATGCCGCCGAAGCGACGTACGTTGACGCTACCATCCGGGCGACGGCTCCATGGGCATCCCCACAGTTCCAGTTGGGTCATTTCGGTTGGGCAGTGGTGGACGAAATAATCCACGACATCCTGCTCACACAACCAGTCGCCACCCGCTACTGTATCGTGAAAGTGATATTCGAAGCTGTCATGATCCTGCGCGACAGCGGCGGAGCC > NC_000913/4381758‑4382165 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |