Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,326,570	G→A	G55G (GGC→GGT)	yjdM ←	zinc ribbon domain‑containing protein YjdM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,326,570	0	G	A	100.0%	40.1 / NA	18	G55G (GGC→GGT)	yjdM	zinc ribbon domain‑containing protein YjdM
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (7/11);  total (7/11)

GGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCGCCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAGGTGTATTCGGAGTTGCATTTTGGGCAGTGTGGTAATGACATGTGGATTTCCTCAAAAGTCAGC  >  NC_000913/4326335‑4326756                                                                                                                                                                                                                                            |                                                                                                                                                                                           ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACAGATCCCATTACCATCCGTTCTTTTTCACAAAATCAGATTTCAGTTTCATCGGACCAAACCCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACATTTCACCTTCAGATCTTTAATGATGGAAACGCTGTCACCGCcagccagc                                                                                                                                                                                >  1:286398/1‑248 (MQ=255)                           gcgcGAGCGCCTTAGCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTGTGCAATCGATGTTATGGTCGCCTTCACCCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTGCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCATATTGCCGTTAGCa                                                                                                                                                                 <  1:104090/237‑1 (MQ=255)                                          ccGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGTCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATTATGTTAACGCTTTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATc                                                                                                                                                     <  1:47845/234‑1 (MQ=255)                                                 aCCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTcagc                                                                                                                                                                                    <  1:111262/196‑1 (MQ=255)                                                                          tttCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCAGCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGc                                                                                                                        <  1:117727/231‑1 (MQ=255)                                                                                            cAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAggn                                                                                                      <  1:82203/231‑2 (MQ=255)                                                                                            cAGTTTCATCGGACAAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCtg                                                                                                                                    >  1:15662/1‑201 (MQ=255)                                                                                                                                                 cAACCNNGCNNNTGNNTTTCACTTTGGTGCCAATTTTCANCATCGAAGAGCTACCTTTCACCTTCAGCTNTNTNATGANNGTANCGCTGTCACCNTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTTGCTTNCNtg                                                                                                                                    >  2:246339/1‑148 (MQ=255)                                                                                                                                                 cAACCAGGCGGATGGTTTTCACTTTGGTGCCAATTTGCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAGTGATGGTAACGCTCTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTTGCTTTCCtg                                                                                                                                    <  1:246339/148‑1 (MQ=255)                                                                                                                                                   aCCAGGCGGAGGTTTTTCACTTTGGTGCAAATTTTCAGCAGCAAAGAGCTCCCTTTCACCTTCAAATTTTAAATGATGGTAACGCTGTCACCGTAAGCCAGCAGATTGCGGTTAGCATCTTTAACGATCAGCCGGTCGTTTGCCGGTGCAGGTTCTGCGTCGTTCCATTCGGAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAgn                                                                <  1:38648/214‑2 (MQ=255)                                                                                                                                                                ttttCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCGGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGAGTTACATGCCGTTATCTTCGTAGGTGTATTCGGAGTTGCATTTTGG‑CAGTGTGGTAATGACATGTGGATTTcc              <  1:266728/250‑1 (MQ=255)                                                                                                                                                                    naCTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAGGTGTATTCGGAGTTGCATTTTGGGCAGTGTGGTAATg                            >  1:57729/2‑233 (MQ=255)                                                                                                                                                                    cACTTTGGTGCCAATTGTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAAc                                                                                                                                                         <  1:179893/108‑1 (MQ=255)                                                                                                                                                                            tGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGTTCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAGGTGTATTCGGAGtt                                                   <  1:7634/202‑1 (MQ=255)                                                                                                                                                                             nccAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAGGTGAATTCGGAGTTGCATTTTGGGCAGTGTGGTAATGACATGTGGATTTCCTCAAAAGTcagc  >  1:202531/2‑250 (MQ=255)                                                                                                                                                                              ccAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCTGATCTTTAATGATGGTAACGCTGTCACCGTCGGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCGCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATTTACATGCCGTTATCTTCGTAGGTGTATTCGGAGTTGCATTTTGGGCAGTGTGGTAATGACATGTGGATTTCCtn            <  1:58192/239‑2 (MQ=255)                                                                                                                                                                                      cAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGt                                                                   >  1:20282/1‑176 (MQ=255)                                                                                                                                                                                       aGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCACCGTCAGACAGCAGATTGCCGTAAGCATCTTTAAAGATCAGCTCGTCGCTTTCCTGTGCGGGATCTGCGTCGTTCCATTCGTAGGcgc                                                                                                    >  1:166111/1‑140 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                           GGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTCAACCAGGCGGATGTTTTTCACTTTGGTGCCAATTTTCAGCATCGAAGAGCTACCTTTCACCTTCAGATCTTTAATGATGGTAACGCTGTCGCCGTCAGCCAGCAGATTGCCGTTAGCATCTTTAACGATCAGCTCGTCGCTTTCCTGTGCAGGTTCTGCGTCGTTCCATTCGTAGGCACATTCCGGGCAGATGTACATGCCGTTATCTTCGTAGGTGTATTCGGAGTTGCATTTTGGGCAGTGTGGTAATGACATGTGGATTTCCTCAAAAGTCAGC  >  NC_000913/4326335‑4326756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑