| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 68,465 | C→T | Q528Q (CAG→CAA) | araB ← | ribulokinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 68,465 | 0 | C | T | 93.3% | 31.7 / ‑6.6 | 15 | Q528Q (CAG→CAA) | araB | ribulokinase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (8/6); minor base A (1/0); total (9/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGCATTAACGACGTGCTCGGCATGTTGGGTGACCTGACGCAGGGTTTCCGGGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCCTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGCACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCAGCAGGCCTGCATAATGACCTGGTTTTTCCGCGCGATGCCGCCCAGTG > NC_000913/68226‑68679 | gcgcATTAACGACGTGCTCGGCATGTTGGGTGACCTGACGCAGGGTTTCCGGGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCa < 1:9549/251‑1 (MQ=255) cATTAACGACGTGCTCGGCATGTTGGGTGACCTGACGCAGGGTTTCCGGGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACgg > 1:52464/1‑251 (MQ=255) cATTAACGACGTGCTCGGCATGTTGGGTGACCTGACGCAGGGTTTCCGAGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCATGCTCGCTGCACgg > 1:52480/1‑251 (MQ=255) ggTTTCCGGGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTAGCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTgn < 1:34902/237‑2 (MQ=255) aCAGATGCTGGCTGCCAATGACAAACCCCACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGtn < 1:37832/251‑2 (MQ=255) gCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCTCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTATCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGCACTGGTCAGCGGCAACAATTTg > 1:52519/1‑251 (MQ=255) ncTGGGCAGCCTGTGCCGGGGCGGAAGTTGGACGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGgcagc > 1:261324/2‑196 (MQ=255) tGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGATCGGCGCTCCTCGTCCATTGCTGATCGCGGCGATCAAGCTGTTCAACCCGTTGTGGTTGCTCGCTGCACAGTTGCCGGGTTTTCTCTACCGCACCGGCCCTTTTTTgctgag > 1:318296/1‑154 (MQ=255) ggggCTGAAGGTGGAAGATAGTGTTGTTCTGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGcc < 1:41617/126‑1 (MQ=255) cATCGCCCATTGCTGATAGCGGCGATAAGGCTGTTCAAAGGGTTGTGCTTGCTCGCTGACCGGTTGCAGGGTTTTCTCTACAGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGAGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGAACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCAGCAGGCTTGCATAATGACCTGGTTTTTCcgcgcg > 1:160193/1‑250 (MQ=255) cTGATAGCGGCGATAAAGCTGTTCAAATCGTTGTGCTTGCTCGCtn < 1:204784/46‑2 (MQ=255) cTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTg > 2:204784/1‑46 (MQ=255) gATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGCACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCAGCAGGCCTGCATAATGACCTGGTTTTTCCGCGCGATGCCGCCCAGTg < 1:127283/249‑1 (MQ=255) gnggcgATAAAGCTGTTCAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGCACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCAGCAGGCCTGCATAATGACCTGGt > 1:255706/1‑221 (MQ=255) cAAAGCGTTGTGCTTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCCCTGGACATTTTTTTCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGCAGACGGCAGCAAACATCGCCGCACCGAGCGCACAGAACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCCGCAGGCCTGCATCATggc > 1:120233/1‑197 (MQ=255) | GCGCATTAACGACGTGCTCGGCATGTTGGGTGACCTGACGCAGGGTTTCCGGGCCATACAGATGCTGGCTGCCAATGACAAACCACACTTCATAATTATCAAAAATCGTCATTATCGTGTCCTTATAGAGTCGCAACGGCCTGGGCAGCCTGTGCCGGGGCGGAAGTTGGAAGATAGTGTTGTTCGGCGCTCATCGCCCATTGCTGATAGCGGCGATAAAGCTGTTCAAAGCGTTGTGCCTGCTCGCTGCACGGTTGCAGGGTTTTCTCTACCGCACTGGCCATTTTTTGCTGAGCTGATGGGATGTCTGCGTGCACTTTCGCGGCGACGGCAGCAAAAATCGCCGCACCGAGCGCACAGCACTGGTCAGAGGCAACAATTTGCAGCGGGCGATTCAGCACGTCGCAGCAGGCCTGCATAATGACCTGGTTTTTCCGCGCGATGCCGCCCAGTG > NC_000913/68226‑68679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |