| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,321,220 | G→A | P10S (CCC→TCC) | phnH ← | carbon‑phosphorus lyase core complex subunit PhnH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,321,220 | 0 | G | A | 100.0% | 44.2 / NA | 17 | P10S (CCC→TCC) | phnH | carbon‑phosphorus lyase core complex subunit PhnH |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/8); total (9/8) | |||||||||||
GGCGCGTTGGTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGGAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGCCATACGGTCAGCGTCCAGCGGGGCAATAAGGGTTTCTGATAAGTTTTGAAAGTGGCGAGATTGCTGCATCAGCGCGTCAATCAGCGC > NC_000913/4320997‑4321411 | ggcgCGTTGGTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGAAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCCGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCCTGGCCTTTAACACGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCAt > 1:284491/1‑251 (MQ=255) tGGTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGACAGCCACACCGGCGCGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCAGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGttat > 1:161752/1‑249 (MQ=255) ggTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGTCAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGAATAAAAGCGGTTTCCAGGGTCATGCGTTGtc > 1:329453/1‑251 (MQ=255) ggTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGt < 1:209621/250‑1 (MQ=255) gCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATAGGCCAGTGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGCTGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATACTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCCTGCGTTg > 1:242867/1‑238 (MQ=255) ngTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTaa > 1:196157/2‑248 (MQ=255) ggTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACTCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCGTATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCAGAAAAGCGTTTACCAGTCTCATGCGTTGTCTCCGCTAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACttn < 1:66129/251‑2 (MQ=255) cAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCan < 1:202002/215‑2 (MQ=255) cTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGttt < 1:22363/139‑1 (MQ=255) tatTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTg < 1:281513/178‑1 (MQ=255) gggCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCTCTTCGGCCTGGCGTGCGGCAATGCGTGCCATACGGTCAGCGTCCAGCGGGGCAATAAGGGTTTCTGATAAGTTTTGAAAGTGGCGAGATTGCTGCATCAgcg > 1:316560/1‑251 (MQ=255) gCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGCCATACGGTCAGCGTCCAGCGGGGCAATAAGGGTTTCTGATAAGTTTTGAAAGCGGCGAGATTGCTGCATCAGCGCGTCAATCAgcgc > 1:331981/1‑251 (MQ=255) agctcATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCCNCCTNNNNNGcnn > 2:196951/2‑144 (MQ=255) gCCTTTAANAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCNAGGGTCATGNNTTNTCTCCNCNNNCNNNCGNAAAGAAGTCGACCCGGCTGNCGNNCACTTCNGCCTGGCGTGCGGCAATGCGTGCCac < 2:71957/151‑2 (MQ=255) gCCTTTAACAGGCGCCGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGCCac > 1:71957/1‑150 (MQ=255) gCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGc < 1:313880/148‑1 (MQ=255) ccTGCACGGAAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATTGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGCCATACGGTCAGCGTCCAGCGGGGCAATAAGGGTTTCTGATAAGTTTTGAAAGTGGCGAGATTGCTGCATCAgcgn < 1:84579/189‑2 (MQ=255) | GGCGCGTTGGTATGAAAACGCAGGCTCTGGTTGACGATATCGTTATTTAATGGGGTAGAAAGCCACACCGGCGTGTCGTTATCGGCCAGCGTCAGCAGCACGCTGGTGGTGGCGATATTCAGCGGTTGCCAGCCGCGTTTGAGCTGATGCAGGGCGACAATCACGCCCGGCTCGCTCATGGCCTTTAACAGGCGACGAAAACTGTGCTGGGCATCCTGCACGGGAAGCATAAAAGCGGTTTCCAGGGTCATGCGTTGTCTCCGCGAACCATCGTAAAGAAGTCGACCCGGCTGGCGTTCACTTCGGCCTGGCGTGCGGCAATGCGTGCCATACGGTCAGCGTCCAGCGGGGCAATAAGGGTTTCTGATAAGTTTTGAAAGTGGCGAGATTGCTGCATCAGCGCGTCAATCAGCGC > NC_000913/4320997‑4321411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |