| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,306,896 | G→A | P302S (CCA→TCA) | alsK ← | D‑allose kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,306,896 | 0 | G | A | 100.0% | 42.7 / NA | 18 | P302S (CCA→TCA) | alsK | D‑allose kinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (11/7); total (11/7) | |||||||||||
CGTTATCATAATTGGGAAATTGCGACTTTAATAAGTGGAAGTGTGAGCGGAACGCGCCATTTTATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGTCATGGCAACGAGAGTCTCGCGTGGGAAGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGG > NC_000913/4306665‑4307105 | ngTTATCATAATTGGGAAATTGCGACTTTAATAAGTGGAAGTGTGAGCGGACCGCGCCATTTTCTTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGcc > 1:60613/2‑251 (MQ=255) ngAAATTGCGACTTTAATAAGTGGAAGTGTGAGCGGAACGCGCCATTTTATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCAcc > 1:192285/2‑251 (MQ=255) cGACTTTAATAAGTGGAAGTGTGAGCGGAACGCGCCATTTTATTAGGCCTTTGTGCTGCAGCGGGAAAATTACAGTACAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAgcgc > 1:159219/1‑251 (MQ=255) gAAGTGTGAGCGGAACGCGCCATTTTATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATg > 1:106334/1‑210 (MQ=255) gAGCGGAACGCGCCATTTTATTAGGCATTTGTGATGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGGTTTATGTGTTTATTATATATATTGTTCCTGTCGTTGGCACAGCGGGACATGGCGCTACTGTGCCAACTTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAATCGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAggc < 1:157923/251‑1 (MQ=255) gAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAGGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGAc < 1:305122/251‑1 (MQ=255) naaaaTTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTCTTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGAGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGgcgc > 1:33927/2‑249 (MQ=255) aaaaTTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGGTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAgg < 1:148526/251‑1 (MQ=255) naaaCTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGt > 1:32385/2‑251 (MQ=255) aaaCTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTCGGCCCAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGTc > 1:280848/1‑251 (MQ=255) aaaTAATATGAGTCGTTTTATGTGTTTATTATATATATTGTTCCTGTCGTTGGCAAAGCGGGGAATTGCGCTCCTGTGACACCGTTTTACTCATGGGGCTTTAGCACAGCAATGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGCGTCATGGCAACGagaggct > 1:287785/1‑248 (MQ=255) atnnNNNACCNGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAg < 2:192285/144‑1 (MQ=255) ccTGTCGTTGGCACACCGGGACATTGCGCTACTGTGCCCGCGTTTTACTCATGGGGCTTTAGCAAAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGCAGCTGAGGCGGCAATTAAGCGCACGACATGATGCGGCAGTGGACGGCGCCGGTACTTTTGGGTCATGGCAACGCGAGTCTCGCGTGGGAAGGCGGGCATATCCATCACg > 1:45486/1‑238 (MQ=255) tGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCAccc > 1:13458/1‑85 (MQ=255) tGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCAccc < 2:13458/85‑1 (MQ=255) gtgCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGTCATGGCAACGAGAGTCTCGCGTGGGAAGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCtgg < 1:119288/251‑1 (MQ=255) tttAGCCCAGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACtttt < 1:43782/131‑1 (MQ=255) caGAACTGTGACAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAACGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGTCATGGCAACGAGAGTCTCGCGTGGGAAGGCg > 1:147960/1‑159 (MQ=255) | CGTTATCATAATTGGGAAATTGCGACTTTAATAAGTGGAAGTGTGAGCGGAACGCGCCATTTTATTAGGCATTTGTGCTGAAGAGGGAAAATTACAGTAAAACTATCATTGCAGAAAATAATATGAGTCGTTTTATGTGTTTATTATATATATTGTACCTGTCGTTGGCACAGCGGGACATTGCGCTACTGTGCCAACGTTTTACTCATGGGGCTTTAGCACAGAACTGTGGCAAAAAACGTTGATGCGCCAATATTGCTGCACCCTGAGCGCCATTAAAGTCAGAAGATGAGGCGGCAATAAAGCGCACGACCTGATGCGGCAGTGGACGGCGCAGGTACTTTTGGGTCATGGCAACGAGAGTCTCGCGTGGGAAGGCGGGCATATCCATCACGCCACCGCCCAGGATCACCGCATCGGGATCGAACAGATTAATGCTGG > NC_000913/4306665‑4307105 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |