| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,213,776 | G→A | F116F (TTC→TTT) | yjaB ← | peptidyl‑lysine N‑acetyltransferase YjaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,213,776 | 0 | G | A | 90.0% | 17.3 / NA | 10 | F116F (TTC→TTT) | yjaB | peptidyl‑lysine N‑acetyltransferase YjaB |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (5/4); minor base C (1/0); total (6/4) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAATCGTGTCACCATTGG‑TGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACT > NC_000913/4213578‑4213998 | cAGTGAGAGTGCGGTCATGACAATGCTTAAGCAAAAAGAATCTTGTC‑CCATTGGGTGGGTACTAACCCTGAAGTGCAGCCCACGGGGATGAAAAAAAACCGCCGCCCCCCCCAGATACGCCACATGCAGAAGCGGAGACGTTTTCCCAAAATCTTCCGCCCCAGAGGGCCCCGGACCCTAAAATCCCTCCTTCAAAAAAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTg < 1:158474/251‑1 (MQ=255) ggTACTAACCCTGAAGTTCAGCACACCGGGATGAGAAAAAATCGCCTAAGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATc > 1:275972/1‑249 (MQ=255) aGTTCAGCCCACCGGGATGAGAAAAAACCGCCTCCGCCCCCCCATCCGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCCCCTCAGAGCGTCCCGTACCCTTAAACCCCCCCTTCTTAAAAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAgc < 1:158549/251‑1 (MQ=255) gCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTACACCTCAGAGCGTCCAGTAACCTTACAACCCACCTTCTTCTCACCCCCACCCGCCTGCTCATTTTGCTCATTCACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGAGCATGCTCCACCAGCAcc > 1:186236/1‑180 (MQ=255) cccccACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATcc > 1:134605/1‑250 (MQ=255) cccaTACCCCAGATCCAGCAACGAATCCGTTTTCCCCAAATCGTCCCCCTCAAGGCGCCCCTTAACCTAAAACCCCCCCTTCTTAAAAACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATCCAAccn < 1:191776/249‑2 (MQ=255) cGGTTTCCCCACATCGTCCACCTCAGAGCGTCCCGTACCCTTAAAACCCACCCTCTTATCCAACCAAAACGCCTGCTCATACTGCTCATTACCGTTGGTTGTCAGTTCCAGTACCATCGAGAGCGCACGCTCCCCCAGCACCCGACCTCTGCCGCAGACGCGCACCTCAGGATCGCTAAACCGCGCATCCATCtgctgc > 1:186926/1‑199 (MQ=255) ccGTAACCTTAAAACCCACCTTCTTATAAAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTACGGTGCCATCGCGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACt > 1:276186/1‑251 (MQ=255) cccTTAAACCCCCCCTTCTTAAAAACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGc < 1:280536/230‑1 (MQ=255) aCCTTCTTATAAACCCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTc > 1:98326/1‑54 (MQ=255) | CAGTGATAGTGCGGTCATGGCAATGCTTAAGCAGAAATAATCGTGTCACCATTGG‑TGGGTACTAAACCTGAAGTTCAGCCCACCGGGATGAGAAAAAATCGCCTACGCCCCCACATACGCCAGATTCAGCAACGGATACGGTTTCCCCAAATCGTCCACCTCAGAGCGTCCCGTAACCTTAAAACCCACCTTCTTATAGAACCCAACCGCCTGCTCATTTTGCTCATTAACGTTGGTTGTCAGTTCCGGTGCCATCGAGAGCGCATGCTCCACCAGCACCCGACCTACGCCGCAGCCGCGCACATCAGGATCGATAAACAGCGCATCCATATGCTGCCCACTTAGCAACATAAATCCAACCGGCTGATCCCGCTCATTAACCGCGACCCACAACGGCGCTTCCGGCAGGAAGGAACGAACT > NC_000913/4213578‑4213998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |