| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,527,435 | C→T | L323F (CTT→TTT) | igaA → | inner membrane protein IgaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,527,435 | 0 | C | T | 100.0% | 63.3 / NA | 26 | L323F (CTT→TTT) | igaA | inner membrane protein IgaA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/18); total (8/18) | |||||||||||
CTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTG > NC_000913/3527201‑3527679 | cTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAACCGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTACGTCAGGGACGATATTTTTCGCTGCatgatg > 1:123807/1‑250 (MQ=255) tCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTCTTCGCTGCATGATGAAGt < 1:1892/250‑1 (MQ=255) ggCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCTTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTc < 1:277596/251‑1 (MQ=255) tGGGGAGTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTCCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATATCGGTCAACAAACCGATATCGATATCTATGTCGGCTGCCATGTAGTGCGTCAGTGACGATATTTTTCGCTGCATGATGATGTAAAAAACTGGCCGGTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTgg < 1:226126/250‑1 (MQ=255) ggggATTGTTTGGCGAAAACGATCGGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTg < 1:90702/251‑1 (MQ=255) gggATGGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATGGCTCAGGATCTGGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTc < 1:150195/171‑1 (MQ=255) gTTTGGCGACCACGATCAGGAACAGCNCAACAANNTTNCAATCGGTATTATCAACCTNGTNNNTNNNGNCCACTNGCNNCCCTACATTNCTCAGGATCTCGGCCAACAAACCGATATCGATATCTATCTCGACCGCCATGCANTGCGTCAGGNNCGATATTTTTCGCTGCATGATNAAGNNANNANCTTNcc > 2:71780/1‑192 (MQ=255) gTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGc < 1:71780/245‑1 (MQ=255) tGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCGACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACGTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATg < 1:328866/250‑1 (MQ=255) aGGAACAGATCAACAATATTTCCCTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGGCAACAAACCGATATCGATAGCTATCCCGACCGCCATGGAGGTCGTCAGGGACTATAGTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGAGTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTAGATc < 1:169481/251‑1 (MQ=255) aTTGCTCAGGATCTCGGTCAACAAACNGATATCNNTANCTATCTCGACCGCCGTGTCNTGNNNCNNNGNGGTTANTTNNCGCTGCATGNTGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGNGGGCTCGCTNNTGGTGCTGTTTATGCTGATATNCTGNNTNNCNCTGNatn > 2:69351/1‑192 (MQ=255) aTTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGGTTATGCGGATATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAg < 1:69351/244‑1 (MQ=255) tCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGGAGTGCGTCAGGGACGATATTTTTCGCTTCATGATGAAGTAAAAAACTTTCCGATGCAGCACTGGCTGCGCAGTACGATTATCGCTGCGTGCTCGCTGCTGGTGCTGtt < 1:210571/159‑1 (MQ=255) ggATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCCGGGACGATATTTTTCGCTGCATGATGCAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTCCGATTATCGCTGCggg > 1:331876/1‑138 (MQ=255) ngTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTT‑ATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCt > 1:192337/2‑251 (MQ=255) gTCAACAAACCGATATCGATATCTATNTCGACCNNCANGTAGTGCGTCAGGGACGATNTTNNNCNNNGNATGATNAANNAAAAAACTTNCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTNc > 2:70796/1‑144 (MQ=255) gTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGc < 1:70796/144‑1 (MQ=255) cgatatcTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCGGGATCCCGCTGGATATGCCGCTGAAATTCACTCGCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCggg < 1:176586/251‑1 (MQ=255) gatatcTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATAATGAAGAAAAAACCTTTCAGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCCGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGACACCAGCGTCAAACAACTGGCTGACGCTGGCGTGCGGGt > 1:280964/1‑251 (MQ=255) ctatctCGACCGCCATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTTCTGGTGCTGTTTATGCTGTGATTCTGGATGCCGCTGGat < 1:267168/154‑1 (MQ=255) ctcGACCGCCATGTAGTGCGTGAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCt > 1:5710/1‑136 (MQ=255) ccATGTAGTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGGTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCg < 1:41925/249‑1 (MQ=255) gTGCGTCAGGGACGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGc < 1:260570/219‑1 (MQ=255) gTCAGGGACTATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTGACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATc < 1:152698/122‑1 (MQ=255) cGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACAttn < 1:261883/228‑2 (MQ=255) cGATATTTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAAtgtg < 1:87735/251‑1 (MQ=255) | CTATTCGCGCCCCCGGCAAAATCCTCCCTGCGGGAAATTCATTGTCTGCGCGGTACACCCCGTCGTTGGGGATTGTTTGGCGAAAACGATCAGGAACAGATCAACAATATTTCACTCGGTATTATCGACCTGGTCTATCCCGCACACTGGCAGCCATACATTGCTCAGGATCTCGGTCAACAAACCGATATCGATATCTATCTCGACCGCCATGTAGTGCGTCAGGGACGATATCTTTCGCTGCATGATGAAGTAAAAAACTTTCCGTTACAGCACTGGCTGCGCAGTACGATTATCGCTGCGGGCTCGCTGCTGGTGCTGTTTATGCTGTTATTCTGGATCCCGCTGGATATGCCGCTGAAATTCACTCTCTCATGGATGAAAGGCGCGCAGACCATTGAAGCCACCAGCGTAAAACAACTGGCTGACGCTGGCGTGCGGGTAGGCGATACATTGCGTATTAGCGGTACGGGAATGTG > NC_000913/3527201‑3527679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |