| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,442,095 | C→T | A2T (GCA→ACA) | rpsK ← | 30S ribosomal subunit protein S11 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,442,095 | 0 | C | T | 100.0% | 43.9 / NA | 16 | A2T (GCA→ACA) | rpsK | 30S ribosomal subunit protein S11 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/7); total (9/7) | |||||||||||
CAGCGCAACGCTCTGCTGCAACCTGAGCTGCAAACGGAGTGGATTTGCGAGAACCACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGCCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCT > NC_000913/3441885‑3442322 | cAGCGCAACGCTCTGCTGCAACCTGAGCTGCAAACGGAGTGGATTTGCGAGAACCACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTgcg < 1:131603/251‑1 (MQ=255) ctgcAACCTGAGCTGCAAACGGAGTGGATTTGCGAGAACCACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCAc > 1:25318/1‑210 (MQ=255) gCAAACGGAGTTGAGTTGCGAGAACCACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGAGCAGTGATAGTCACGATTGTGTTGTTGAAAGAAGCATGGATAAGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTTCACGAATTGGTGCCTTGTTCATTATTCAATCGCCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTgg < 1:185435/248‑1 (MQ=255) ccACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGCTGGTGATGTTGAACGAAGAATGGCTATGAGCCACGCCGTCAGAGACTTGTTTTATTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTACGCGGACCCTTACGGGTa > 1:210981/1‑214 (MQ=255) gAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGACAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTgg > 1:270451/1‑225 (MQ=255) ccaacGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAAcc > 1:69642/1‑251 (MQ=255) gttgttGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATc > 1:3379/1‑217 (MQ=255) tgAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGGACGTGCGTTGGTCTTGGTACGCTGAc < 1:257150/160‑1 (MQ=255) gaagCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCAc > 1:153472/1‑251 (MQ=255) aTGGATATGAGCCACGCCGTCAGAGACTTGGTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGANNATTTCt > 2:23016/1‑96 (MQ=255) gATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACcgc < 1:259718/150‑1 (MQ=255) aCGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTACACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTa > 1:21081/1‑106 (MQ=255) nagaCTTNNTTTCTTACACGTTTACGTACACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTa < 2:21081/96‑1 (MQ=255) aCTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGTCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGAGCGTTGGTCTTGGTACGCTGACCTCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATCCATCAGGCCCTTGATGCTCATGCTTATTTCACGTCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCAc < 1:330628/251‑1 (MQ=255) cttttACGTGCACGAATGGGTGCCTTTGTCATTATGCAATCCCCCCGATGATTTCGTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCt < 1:172412/105‑1 (MQ=255) aCGTGCACGAATTGGTGCCTTTGTCATTATTCAATCAACCCGATTATTTCTTGCTCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATCCATCAGACGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGTGTGTCGATTTGTCCt > 1:263868/1‑251 (MQ=255) | CAGCGCAACGCTCTGCTGCAACCTGAGCTGCAAACGGAGTGGATTTGCGAGAACCACGGAAACCGGAACCACCGGCTGTTGCCCAACCCAACGCGTTACCCTGACGATCAGTGATAGTCACGATGGTGTTGTTGAAAGAAGCATGGATATGAGCCACGCCGTCAGAGACTTGTTTTCTTACACGTTTACGTGCACGAATTGGTGCCTTTGCCATTATTCAATCACCCCGATTATTTCTTGATCGGTTTGCGCGGACCCTTACGGGTACGTGCGTTGGTCTTGGTACGCTGACCGCGAACCGGGAGACCACGACGATGACGCAAACCGCGATAGCAACCAAGATCCATCAGGCGCTTGATGCTCATGCTGATTTCACGGCGCAGATCACCTTCAACGACAAATTTGGCAACTTCGTCACGCAGCGTGTCGATTTGTCCT > NC_000913/3441885‑3442322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |