| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,438,489 | C→T | S54N (AGT→AAT) | arfA ← | alternative ribosome‑rescue factor A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,438,489 | 0 | C | T | 100.0% | 44.8 / NA | 18 | S54N (AGT→AAT) | arfA | alternative ribosome‑rescue factor A |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (11/7); total (11/7) | |||||||||||
ATTACGGTGTCTTCATTCAAAACGTCTTTGATTTTCTGATTGTGGCCTTTGCCATCTTTATGGCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCACTGGCCTCCCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCATTATCCTTTATCTGCCCTTTAGTATGCTGATATCGACTCATAAAAACTCCAGTTGGTTATTTAACGGCGCGAGTGTAATCCTGCCAGTGCAAAAAATCAACAACCACTC > NC_000913/3438244‑3438717 | aTTACGGTGTCTTCATTCAAAACGTCTTTGATTTTCTGATTGTGGCCTTTGCCATCTTTATGGCGATGAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACGAAAGAAGAAGTATTTCTGACAGAAATTCGTGATTTGCGGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGcc < 1:176523/251‑1 (MQ=255) nccTTTGCCATCTTTATGGCGATTACGCTCATCAACAAACTGAATCGGGAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGTCCTCTCAGTTCCCCCGCATACCATGTTTTCCTTTTCGCAGGTAACt > 1:94673/2‑251 (MQ=255) gCCTTTGCCATCTTTATGGCGATTAAGCTAATCAACAAACGGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGcc < 1:91481/207‑1 (MQ=255) ggCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCCCCTGCACAAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCACTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTAt > 1:224940/1‑251 (MQ=255) gCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGACCCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTCATGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCAATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCATTTCCCCTTCTTAtt > 1:173722/1‑251 (MQ=255) ggAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTccccc > 1:207499/1‑174 (MQ=255) cAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGATCTTAAAAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCTTGTTTTCCTTTTCGCATGTAAc > 1:321845/1‑171 (MQ=255) cAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCATTATCCTTTATCTGCCCTTTAGTATGCTGatat < 1:127697/251‑1 (MQ=255) gTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCTATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATCTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCATTATCCTTTATCTGCCCTTTAGTATGCTGATATCGACTCAt > 1:265266/1‑250 (MQ=255) gTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCa > 1:68761/1‑209 (MQ=255) ncTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATg > 1:193263/2‑127 (MQ=255) gCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGGTCCCCCGATTGCCATGTTTTCCTTTTCGCATg < 2:193263/127‑1 (MQ=255) cTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAACAAGAAGACCCGTGCTAACAACGTGCTTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGCTTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCATTATCCTTTATCTGCCCTTTAGTATGCTGCTCTCGACTCATAAAAACTcc > 1:310498/1‑251 (MQ=255) agagCCGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGcctg > 1:19169/1‑118 (MQ=255) ncANAATNANNGNNCTTNACAAGCGCCTGAAAGCAGAAGNNCATTGGTAANAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTNTCCTTTGCGNNTGNAACTGNCNNNCNNNTTNTTATTTTTCTCTACGCGCTNTCNNAATAAGNGATCATGTAGTAATGCTTCTATCGCa < 2:68761/192‑1 (MQ=255) gcCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCATTGGCCTCTCAGGTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGGCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGAAATGCGTATATCACATTATCCTTTATATGCCCTTTAGTATGCTGATATCGACTAATAAAAACTCCAGTGGGTTATTTAACGGCGCGATTGTAATCCt > 1:5958/1‑251 (MQ=255) gaagaCCAGTGGTAAAAAAGTTATTTACTTTCTTGCCATTGTGCTCTCGGTTCCCCCGATTACCGTGTTTTCCGTTTCGCATGTAACTGCTTTTGCCCTTCTGATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATgtagt < 1:151092/143‑1 (MQ=255) aaaGTGATTTACTTTCTTGCCATTGGCCTCTCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAATGGATCATGTAGTAATGCTTCTATCGCAGTATCCTTTTTCTGCCCTTTAGTATGCTGATATCGACTCATGAAAACTCCAGTTGGTTATTTAACGGCGCGATTGTAATCCTGCCAGTGCAAAAAATCAACAACCActc < 1:212755/251‑1 (MQ=255) | ATTACGGTGTCTTCATTCAAAACGTCTTTGATTTTCTGATTGTGGCCTTTGCCATCTTTATGGCGATTAAGCTAATCAACAAACTGAATCGGAAAAAAGAAGAACCAGCAGCCGCACCTGCACCAACTAAAGAAGAAGTATTACTGACAGAAATTCGTGATTTGCTGAAAGAGCAGAATAACCGCTCTTAACAAGCGCCTGAAAGCAGAAGACCAGTGGTAAAAAAGTGATTTACTTTCTTGCCACTGGCCTCCCAGTTCCCCCGATTGCCATGTTTTCCTTTTCGCATGTAACTGCCTTTCCCCTTCTTATTTTTCTCTACGCGCTGTCGGAATAAGGGATCATGTAGTAATGCTTCTATCGCATTATCCTTTATCTGCCCTTTAGTATGCTGATATCGACTCATAAAAACTCCAGTTGGTTATTTAACGGCGCGAGTGTAATCCTGCCAGTGCAAAAAATCAACAACCACTC > NC_000913/3438244‑3438717 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |