| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,434,376 | C→T | L55L (CTG→TTG) | fmt → | 10‑formyltetrahydrofolate:L‑methionyl‑tRNA(fMet) N‑formyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,434,376 | 0 | C | T | 90.9% | 24.2 / NA | 12 | L55L (CTG→TTG) | fmt | 10‑formyltetrahydrofolate:L‑methionyl‑tRNA(fMet) N‑formyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (5/5); minor base G (0/1); total (6/6) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACTACGTATTATTTTTGCGGGTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTCTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAGTGCTGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCGGTG > NC_000913/3434225‑3434574 | aCTACGTATTATTTTTGCGGGTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTGTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGgtcg < 1:183685/251‑1 (MQ=255) ggTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTgg > 1:3766/1‑202 (MQ=255) gCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAg < 1:14341/250‑1 (MQ=255) gCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAgn < 1:204237/78‑2 (MQ=255) gCGTGTTCACCCAGCCAGACCGAACGGCAGGACGCGGTAAAACAATGATGCCCAGCCCGGTTAAAGTTTTGGCTgggg > 2:204237/1‑75 (MQ=255) gCGTGGTCACCCAGCCAGGCCGACCGGCAGGACTCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGTAAAAAGGTCTACCCGtt < 1:69562/95‑1 (MQ=255) cACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTATGGCTGTGGGAAACGGACTGCCCGCTTTTAAACCt > 1:282187/1‑97 (MQ=255) gccagACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTAAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCTGGCTGATGTTATGGGCGTCGTCGCCTATGTTTTAATTCTGCCGAAAGCAGTGCGGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGcgcg > 1:269540/1‑251 (MQ=255) ccagACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAGTGCTGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCgg < 1:190219/251‑1 (MQ=255) agACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTGTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATGCTGCCGAAAGCAGTGCTGGAGATGCCGCTTCTTGGCTGTAGCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCGGtg < 1:127060/251‑1 (MQ=255) gACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAACAAGGTCTGCACGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGAAACTGGTCGc > 1:302262/1‑112 (MQ=255) ncgGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTTTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCa > 1:78296/2‑67 (MQ=255) | ACTACGTATTATTTTTGCGGGTACACCTGACTTTGCAGCGCGTCATCTCGACGCGCTGTTGTCTTCTGGTCATAACGTCGTTGGCGTGTTCACCCAGCCAGACCGACCGGCAGGACGCGGTAAAAAACTGATGCCCAGCCCGGTTAAAGTTCTGGCTGAGGAAAAAGGTCTGCCCGTTTTTCAACCTGTTTCCCTGCGTCCACAAGAAAACCAGCAACTGGTCGCCGAACTGCAGGCTGATGTTATGGTCGTCGTCGCCTATGGTTTAATTCTGCCGAAAGCAGTGCTGGAGATGCCGCGTCTTGGCTGTATCAACGTTCATGGTTCACTGCTGCCACGCTGGCGCGGTG > NC_000913/3434225‑3434574 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |