| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,162,858 | C→T | Q208Q (CAG→CAA) | plsC ← | 1‑acylglycerol‑3‑phosphate O‑acyltransferase PlsC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,162,858 | 0 | C | T | 100.0% | 54.9 / NA | 21 | Q208Q (CAG→CAA) | plsC | 1‑acylglycerol‑3‑phosphate O‑acyltransferase PlsC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (10/11); total (10/11) | |||||||||||
GCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTGACGCCGACTGAGTGACATATTTGCTCCATGTAAAACTGGCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATACTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGTTTTTTGAAGTGATTCACTACTTCCG > NC_000913/3162613‑3163096 | gcCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTGACGCCGACTGAGTGACATATTTGCTCCATGTAAAACTGGCTAAAGTCATACCGTGCAGGAAAGTGTTCCCCGCAAACATACAGATTGCCGACTTAAAATTTTCCGGCGGTTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATattgact > 1:329784/1‑251 (MQ=255) gCACAAAGTGCAATCCCCGATGCCTGAATGAACTGACGCCGACTGAGTGACATATTTGCTCCATGTCAAACTGGCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTACGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACg > 1:314553/1‑251 (MQ=255) tgaatgaaCTGACGCCGACTGAGTGACATATTTGCTCCATGTAAAACTGGCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTggcggc < 1:276732/239‑1 (MQ=255) gCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCAGTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTg < 1:51251/251‑1 (MQ=255) gCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCACCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTg > 1:13666/1‑251 (MQ=255) tCCCCGCAAAAATACAGATTGCCGACCTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGCGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCCGCATTTCGACACTCACCAGACCGTTGTGCAGTCGAATAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCggg > 1:158651/1‑249 (MQ=255) cccGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGTCAGCCAGCTCACGAACCTGATCTTTGCCATATTGTCTGACGTCAATGTGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATGAAGATTAATCTGATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGAcgc < 1:305266/251‑1 (MQ=255) cccGCAAAAATACAGATTGCCGACTTAAACTTTGCCGGCGGCTTCGCGTGCTGCGACTTCTTTATCGAGCTCGGCGATTTTGTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATGGACTGACGTCAATTGGCGGCAGCATTTCGGCAATCACCAGACCGTTGTGCAGTGGATTAAGAGTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGAcgc < 1:218387/251‑1 (MQ=255) cAGATTGCCGAATTACACTTTTCCGACGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGACCGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGCCAATCACCAGACCGTTGTGCAGTCGCTTCAGATTAATCTTATTCGGAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTg > 1:218062/1‑251 (MQ=255) aGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACGTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAAGGACAATGGGCAGCCATCTCACGAACCGGATCTTTGCCATATTGACTGTCGTCAATTGGCGGCAGCATTTCTACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGc < 1:131858/251‑1 (MQ=255) ggcgtcTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACTAACCGGATCTTTGCCATATTCACTTACGTc < 1:247638/114‑1 (MQ=255) gACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCCGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGAc > 1:41212/1‑174 (MQ=255) cATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTNTAGNNNNNcann > 2:203196/1‑144 (MQ=255) tATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATg < 1:108612/250‑1 (MQ=255) gAACGACAATGGGCAGCCAGCTCACGAACATGATCTTTGCCATATTGAATGACGTCACTTGGCGGCAGCATTTCGACAATCACCAGACAGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGAcg > 1:268813/1‑156 (MQ=255) gataaTGGCCAGCCAGCTCACGAACCTGTTCTTTGCCATATTGACTGCCGTCAAGTGGCGGCAGCATTCCGACACTCCCCAGACCTTTGGGCAGCCGATTATGATAAATCTGTTTCGAAGTTGTATAGAGTCGCACGGGAATCAGCGGGACGCCCGCCGCAATTGCGGCGTGAAATGCTCCAGTGTTGAACGGTAGCAGGCCCCGACCACGGCTGCGGGTTCCGTCCGGGAACATCCAGATGGAAATACgg < 1:166572/248‑1 (MQ=255) ggCAGCCAGCTCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACAGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGttttt > 1:139243/1‑251 (MQ=255) ntCACGAACCTGATCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCcg > 1:79237/2‑187 (MQ=255) cTGATCTTGGCCATATTGACTGACGCCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGGAGAGACGCACACGGAAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCCGGCCGCGACCACGGCTGCGGGTTCCTTCCgg < 1:256438/204‑1 (MQ=255) tCTTTGCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTTAACGTTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGTTTTTTGAAGTGATTCACTACTTCCg < 1:48088/250‑1 (MQ=255) ttGCCATATTGCCGGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGTTTTTTGAAGTGATTCACTACTTccn < 1:203196/247‑2 (MQ=255) gCCATATTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGtttttt > 1:73338/1‑225 (MQ=255) | GCCTGCACAAAGTGCAATCCCCGATGCCTGAATGAACTGACGCCGACTGAGTGACATATTTGCTCCATGTAAAACTGGCTAAAGTAATACCGTGCAGGAAAGTGTTCCCCGCAAAAATACAGATTGCCGACTTAAACTTTTCCGGCGGCTTCGCGTTCTGCGACTTCTTTATCGAGCTCGGCGATTTTTTGTTCCATTATCGAACGACAATGGGCAGCCAGCTCACGAACCTGATCTTTGCCATACTGACTGACGTCAATTGGCGGCAGCATTTCGACAATCACCAGACCGTTGTGCAGTCGATTAAGATTAATCTTATTCGAAGTTGTAGAGACGCACACGGGAATAATCGGGACGCCCGCCGCAATTGCCGCGTGAAATGCTCCAGTCTTGAACGGTAGCAGGCCGCGACCACGGCTGCGGGTTCCTTCCGGGAACATCCAGATGGAAATACGGCGTTTTTTGAAGTGATTCACTACTTCCG > NC_000913/3162613‑3163096 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |