| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,558,699 | Δ6,790 bp | intZ–[eutA] | intZ, yffL, yffM, yffN, yffO, yffP, yffQ, yffR, yffS, [eutA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2558699 | 2565488 | 6790 | 15 [0] | [0] 14 | intZ–[eutA] | intZ,yffL,yffM,yffN,yffO,yffP,yffQ,yffR,yffS,[eutA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2558698 | 0 (0.000) | 14 (1.040) | 11/294 | 0.1 | 100% | intergenic (‑19/‑160) | eutB/intZ | ethanolamine ammonia‑lyase subunit alpha/putative phage integrase IntZ |
| ? | NC_000913 | 2565489 = | 0 (0.000) | coding (1396/1404 nt) | eutA | ethanolamine ammonia‑lyase reactivase EutA | |||||
ATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA‑ACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACG > NC_000913/2565258‑2565693 | cagtcatcttcataggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTtcacc < 1:22165‑M2/20‑1 (MQ=255) ggcaatcaccggattattgcggatgtccgctacggtcatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAAc > 1:280365‑M2/218‑251 (MQ=255) ccggcttgtggccgatgtcccagtcggttatttccgacaccacctgctttgcccccccccgctcctgggagctggccgcggcgccgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgcctaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGc < 1:221476‑M2/42‑1 (MQ=255) gtccgctacggtaatttccgacaacacctgctttgccgccacgcgctcctgtgagcttgccgatgcgacacccgccagaacttcccccgaacgcagttcgttggctttcgccagcacctcttttacatccttaaactgatatacactgccgaacaatgcggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTAACCGTCACCGGCACACCCGATCCGCCAAAAAGAGGCGTAcc > 1:151367‑M2/194‑251 (MQ=255) cgacaaccccggctttgccgccacgcgctcctgggagcttgccgctgcgacgcccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTcccc < 1:218411‑M2/76‑1 (MQ=255) ccgccagcacatcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt > 1:6290‑M2/123‑160 (MQ=255) catcccccgaactcagttcgttggctttagccagcacctcttttacatccttaaacggatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGATTGATTTCACCGTCACCGGCACAGCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGGGGACAAGCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGcgcaaaa < 1:313011‑M2/138‑3 (MQ=255) catcccccgaacgcagttcgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACACCCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGcaac > 1:265874‑M2/114‑250 (MQ=255) cgttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctnnggaagg > 2:24511‑M2/96‑96 (MQ=255) gttggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctaaggaagGCAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATCGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGC‑ACACACATGCACAGAGCTTTAcc > 1:240305‑M2/95‑251 (MQ=255) tggctttagccagcacctcttttacatccttaaactgatatacattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGat < 1:144621‑M2/67‑1 (MQ=255) nctttagccagcacctcttttacatccttaaactgatataccttgccgaacaatgtggtctttcgtttcatacgtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAACGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGCACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA‑ACATGcc > 1:33640‑M2/91‑235 (MQ=255) annctgatanncattgccgaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGAt < 2:6290‑M2/38‑1 (MQ=255) gaacaatgtggtctttagtttcataagtcgttccctcaggaagGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA‑ACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAAcg < 1:11674‑M2/205‑1 (MQ=255) | ATCGGCAAAGGCAAGAAAGGTGACAAGCTGATAACTTTGCTTCCCAACTGGATTGATAAGCTGGGAGACGAATAAACCAGCCTTCAACCCCATCTCATCAATCAACGCCCGGCCCCGCTGCCGGGTTTTTGCTATGCACCACAATTACCCCAACCGGATACACAGCCGGATACAATTCCACCAGCACCCAGCCACCCAGCGCCACCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCAATGTCGATATAGTCCCCCGCGCGGACAATCACTTCGTCAATGACTGCCAACGGGAGTTGTTGTAGCTGTGGGCGCAACA‑ACATGCCCAGAGCTTTACCAAAGTCCTGCCCGGCCACCACCAGCAGGGGATGCGGATTCGGAAAACG > NC_000913/2565258‑2565693 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |