| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,882,058 | G→A | E49E (GAG→GAA) | dmlA → | D‑malate/3‑isopropylmalate dehydrogenase (decarboxylating) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,882,058 | 0 | G | A | 100.0% | 14.9 / NA | 8 | E49E (GAG→GAA) | dmlA | D‑malate/3‑isopropylmalate dehydrogenase (decarboxylating) |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (3/5); total (3/5) | |||||||||||
GTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTTGTGGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCAACCTGCGCCCGGTTCGTCTCTTTCCTG > NC_000913/1881880‑1882251 | gtCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGACAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAATATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTAt > 1:74016/1‑251 (MQ=255) cgtgATTGGCAAAGAAGTCCTTCCTGTAGGGATTCGCGTGTTACAGGCTGCCGCGGAGCGCTGGGGCTTCGCCTTTAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAATATTACAGCCAGCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTGCCGGACCATATTTCGTTGTGGGGTTCGCTGCTGAAATTtc < 1:154880/248‑1 (MQ=255) cGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAATATTACAGCCATCACTGTAAAATGAGGCCGGACGACTGGCATGAGCAACTCAGGCGTGGCGACGCCAGCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTtg < 1:96616/178‑1 (MQ=255) cGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAATATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTGCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGTACCATATTGCGTTGTGGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCATCCTGCGCCCGATTCGTCTCTTTCCTg < 1:186371/251‑1 (MQ=255) ggCTTNGACTTNANNATTGAGCAAATGGAGTGGGNGAGCTGCGAATATTANAGCCNTCACGNttn > 2:94129/1‑63 (MQ=255) ggCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAATATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTTGTTGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCAACCTgc < 1:203494/217‑1 (MQ=255) ggCTCCGCCTTGAGTTTTGAGCAAGTGGAGTGGGCGAGCTGCGAATATTACAGCCATCACGGTAAAATGATGCCGGTCGACTGGCATGAGCAACGTAGCCGTTTCGCCGGCATCTATTTTGGTGCCGTCGGCTGGCCGGATAcc < 1:94129/144‑1 (MQ=255) gTGGGCGAGCTGCGAATATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCg > 1:71449/1‑121 (MQ=255) | GTCAATTTTGATGGTCAGGAAGTGAGAACCCAATGATGAAAACGATGCGTATTGCTGCGATCCCGGGAGACGGGATTGGCAAAGAAGTCCTTCCTGAAGGGATTCGCGTGTTACAGGCTGCCGCTGAGCGCTGGGGCTTCGCCTTGAGTTTTGAGCAAATGGAGTGGGCGAGCTGCGAGTATTACAGCCATCACGGTAAAATGATGCCGGACGACTGGCATGAGCAACTTAGCCGTTTCGACGCCATCTATTTTGGTGCCGTCGGCTGGCCGGATACCGTTCCGGACCATATTTCGTTGTGGGGTTCGCTGCTGAAATTTCGTCGTGAATTCGACCAGTACGTCAACCTGCGCCCGGTTCGTCTCTTTCCTG > NC_000913/1881880‑1882251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |