| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,878,973 | G→A | intergenic (+25/+34) | yoaJ → / ← yeaQ | uncharacterized protein YoaJ/PF04226 family protein YeaQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,878,973 | 0 | G | A | 87.5% | 12.3 / ‑5.4 | 8 | intergenic (+25/+34) | yoaJ/yeaQ | uncharacterized protein YoaJ/PF04226 family protein YeaQ |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (4/3); total (4/4) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAATAGCAAAGGCTGCCTGTGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCC > NC_000913/1878754‑1879208 | ccTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTAGTGTCTTACTCGGCACTGAGCTGGGATGGTGGTAACGTCGCCTCTAAAAAATAGCAAAGGCTGCCTGTGTGCAGCCTTTGTGCAATTTAAg < 1:193072/251‑1 (MQ=255) cATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAATAGCAAAGACTGCCTGTGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATaaag < 1:205620/251‑3 (MQ=255) aNGCTGGCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTAGTCGGCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAATAGAAAAGACTGCCTGTGTGCa < 2:132535/135‑1 (MQ=255) tgtgGCGATTATTGTCGTACTCGGCANTGAGCTNNGANGGTGGTAACGTCACCTCTANAANNNANNNANGACTGNCTNNGTGCAGCCTNTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAACTAGCACGACAANCGCACCAATNNCGGCAACCACGAAGCTGCCAANATTNNANNCNTCGNCtn > 2:50889/1‑192 (MQ=255) ngATTATTGTCGTACTCGGCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAATAGCAAAGACTGCCTGGGCGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAACTAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAg > 1:133147/2‑204 (MQ=255) gCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAACAGCAAAGACTGCCTGTGTGCAGCCTTTGTGCAATTAAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACAAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATACAGAATCCAc > 1:157991/1‑251 (MQ=255) aTGGTGGTAACGTCACCTCTAAAAAATAGCAAAGACGGCCTGTGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTAcc < 1:50889/251‑1 (MQ=255) nnnnnnnnnncANNNNNTGCNTGGGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACat < 2:133147/144‑2 (MQ=255) aaaaTAGCAAAGACTGCCTGTGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATATTCCTGTAGATAAATAGCACGACAATCGAACAAATAACGGCAACCACGAAGCTGCCCAAATTGAAGCCATCGACTTTCCAAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATATTTACCTGGCATGATCAACTTCGcc > 1:154499/1‑248 (MQ=255) | CCTTTTGATTGGTGATAACATGCGAATCGGTATTATTTTTCCGGTTGTAATCTTCATTACAGCGGTCGTATTTTTAGCATGGTTTTTTATTGGCGGCTATGCTGCCCCGGGAGCATAAAGATGAAAAAAACAACGATTATTATGATGGGTGTGGCGATTATTGTCGTACTCGGCACTGAGCTGGGATGGTGGTAACGTCACCTCTAAAAAATAGCAAAGGCTGCCTGTGTGCAGCCTTTGTGCAATTTAAGCGTTAACTTTTAATCTTCCTGTAGATAAATAGCACGACAATCGCACCAATAACGGCAACCACGAAGCTGCCAAAATTGAAGCCATCGACTTTACCAAAGCCAAACAGCGTGCTGATCCATCCGCCGACTACGGCACCGACTATCCCCAGCAGGATAGTCATAAAGAATCCACCTCCATCTTTACCTGGCATGATCCACTTCGCC > NC_000913/1878754‑1879208 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |