| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,874,612 | G→A | V87V (GTG→GTA) | yeaL → | DUF441 domain‑containing inner membrane protein YeaL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,874,612 | 0 | G | A | 88.9% | 13.8 / NA | 9 | V87V (GTG→GTA) | yeaL | DUF441 domain‑containing inner membrane protein YeaL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (5/3); minor base C (1/0); total (6/3) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
GGCTTTATCAGTCATAACACCACTGTCGCCGTTTCAATTCTGGTGTTAATCATTGTCCGCGTCACACCGTTAAGCACCTTTTTTCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCCCCCATCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTGGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCGCTGTTTCGCGGCGTACCGGTTGGGCCGCTTATTGCCGCGGGTCTGGTTTCGCTGATTGTGGGGA > NC_000913/1874397‑1874790 | ggCTTTATCAGTCATAACACCACTTTCGCTGTTTCAATTCTGGTGTTAATCATTGTCCGCGTCGCACCGGTAAGCATCTTTTTGCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGGCGATTGGCGTTATGGCCCGCATCGCCAGCGGGACGCTTGCGCGCTCAACCTTGATTCACTCGTTTCTGATCTGGAAATCACGGATAGGGATTGCAGTAGGCGTGATTGTCTCCTGGCtggg < 1:191813/251‑1 (MQ=255) ggTGTTAATCATTGTCCGCGTCACACCGTTAAGCACCTTTTTTCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCCCCCAGCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCATTGGTAGCGATTGCAGTAGGCGTGATTGTCTCGTGGCTGGGTGGGCGTGGCGTGACGTTAAAGGGCAGCCAGCCGCAACTgg < 1:47264/251‑1 (MQ=255) aaaCAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCACCCATCGCAAGCGGGCCGCTACAGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTCGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCTCTGTTTCGCGGCGTAcc > 1:196137/1‑251 (MQ=255) gCCCCCATCGCCAGCGGGACGCTACCGCCCTCAATCTTACTTCACTCGTTTCTGAACTGAAAATCACTGGAAGCGATAGCACGAGGCGCGATTGTCTCCTGGTTGGGAGGGCGCGGCGCGAc > 1:93216/1‑122 (MQ=255) gCCCCCATCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTAGCGATTGCAGTAGGCGTGATTGTATCCTGGCTGGGTGGGCGCGGCGTGACGTTAGTGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCGCTGTTTCGCGGCGTACCGGTTGGGCCGCTTATTGCCGCGGGTCTGGTTTCGCTGATAGTGGGGa > 1:27860/1‑250 (MQ=255) ccAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGCAATCCCTGGTAGCGATTGCAGCAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATggg > 1:78625/1‑121 (MQ=255) aCCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGCAGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCagccagcc > 1:96796/1‑107 (MQ=255) cTTGATTCACTAGTTTCTGAACTGGAAATCACTGGAAGCGTTTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCgcggc > 1:156174/1‑82 (MQ=255) cTNGANTCACTCGTTTCTGAANTGGAAATCACTGGTAGCGATTGCAGTAGGCGTGATTGTCTCCTGNNTNNNTNGGCgcggc < 2:156174/82‑1 (MQ=255) | GGCTTTATCAGTCATAACACCACTGTCGCCGTTTCAATTCTGGTGTTAATCATTGTCCGCGTCACACCGTTAAGCACCTTTTTTCCGTGGATTGAAAAACAGGGGCTAAGTATCGGGATAATCATTCTGACGATTGGCGTTATGGCCCCCATCGCCAGCGGGACGCTACCGCCCTCAACCTTGATTCACTCGTTTCTGAACTGGAAATCACTGGTGGCGATTGCAGTAGGCGTGATTGTCTCCTGGCTGGGTGGGCGCGGCGTGACGTTAATGGGCAGCCAGCCGCAACTGGTCGCCGGGCTGCTGGTAGGCACTGTTTTAGGCGTAGCGCTGTTTCGCGGCGTACCGGTTGGGCCGCTTATTGCCGCGGGTCTGGTTTCGCTGATTGTGGGGA > NC_000913/1874397‑1874790 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |