| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,732,436 | C→T | A1117V (GCC→GTC) | lhr → | ATP‑dependent helicase Lhr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,732,436 | 0 | C | T | 100.0% | 15.0 / NA | 8 | A1117V (GCC→GTC) | lhr | ATP‑dependent helicase Lhr |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/4); total (4/4) | |||||||||||
GAACAACTGGCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACCTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGCCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTACGCGACTATTCGTCAGAAATGCTCGATGAATTACTGGCAACCGGTGCGGTTAT > NC_000913/1732207‑1732634 | naacaacTGGCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGCCATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACTTATGCGCGCTTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGATGGTAGCCCGGCGct > 1:44268/2‑251 (MQ=255) ggCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACTTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGATGGTAGCCCGGCGCTCTTTGcn < 1:20895/250‑2 (MQ=255) cgcATGAGTTTAGTCTCGGTATTGCCATTGTCTAAGAGCAGCTTCAGCAACTGCGTGAACAGTGTCTGGTGAGGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACTTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGATGGTAg < 1:195596/230‑1 (MQ=255) gtaTGAAGTATTTCGTCGTCTGCTTTTGCGCGCGCGGAAAGCCGCCAGGGAAGCGCCGCGTCCCGTTGCAGCCCCGATTTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGAGGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATcn < 1:134814/249‑2 (MQ=255) ttCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGACGCGACGCGCCCAGTTCAAGCCACGACTTATGCACGATTGCCACTGGAACGTCAGGGAGTATTAACCGTCACAGATGGTAGCCCGGCGCTATTTGCATCAAAATAGCCAGGCGTTTATGAGGGCGCAGCTGGCGCGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCAGCCTCCCTCTGGGAAAGCCAGCTACTGCCTGCCcgc > 1:106611/1‑251 (MQ=255) ncAGAGAAGCGACGCGTCCCGTTGCAGCCACGACTTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGc > 1:62736/2‑166 (MQ=255) gCAGCCACGACTTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGTCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGACCAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTACGCGACTATTCGTCAGAAATGCTCGATGAATTACTGGCAACCGGTGCGGTTAt > 1:151975/1‑251 (MQ=255) gTATTNNCCNNNACNNATGGTAGCCCGGCGCTCTTTGCCNCACCATCGCCAGGCGTTTATGAGGGCGTANANGNCGTGNNGCGNGTGATCGAACNGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTNCNTGCACGCGTAcgc > 2:159551/1‑159 (MQ=255) gTATTCCCCGTCACCGATGGGAGCCCGGTGCTCTTGTCCTCAACATCGCCAGGGGTTTAGGAGGGCGTAGATGGCGTTATGCGGGTGATCGAACAGCTTGCCGTCGGCTGTTTACCCGCCTCCCTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTAcgc < 1:159551/159‑1 (MQ=255) | GAACAACTGGCTCATGAGTTTAGTCTCGGTATTGCCATTGTCGAAGAGCAGCTTCAGCAACTGCGTGAACAGGGTCTGGTGATGAATCTGCAACAAGACATCTGGGTGAGCGATGAAGTATTTCGTCGTCTGCGTTTGCGCTCGCTGCAAGCCGCCAGAGAAGCGACGCGTCCCGTTGCAGCCACGACCTATGCGCGATTGCTGCTGGAACGTCAGGGCGTATTACCCGCCACCGATGGTAGCCCGGCGCTCTTTGCCTCAACATCGCCAGGCGTTTATGAGGGCGTAGATGGCGTGATGCGGGTGATCGAACAGCTTGCCGGAGTCGGTTTACCCGCCTCACTCTGGGAAAGCCAGATCCTGCCTGCCCGCGTACGCGACTATTCGTCAGAAATGCTCGATGAATTACTGGCAACCGGTGCGGTTAT > NC_000913/1732207‑1732634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |