| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,697,862 | C→T | G60D (GGT→GAT) | hdhA ← | 7‑alpha‑hydroxysteroid dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,697,862 | 0 | C | T | 100.0% | 12.7 / NA | 6 | G60D (GGT→GAT) | hdhA | 7‑alpha‑hydroxysteroid dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/2); total (4/2) | |||||||||||
CATTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGCATATCAAACGGTTTAGGTCCACCGCCACCGGCGTTGTTAACCAGAATATCAACTTTACCCAGCTTACTGATAGCAAAGTCTGCCAGTGCAGAGAGTTCCTGTTCGGAAGTAATATCACAACGGCAGGCAAATGCCTGACCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCG > NC_000913/1697686‑1698014 | caTTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGCCTATCAAACGGTTTAGGTCCAACGCAACCGGCGTTGTTAACAAGAATATCAACTTTACCCAGCTTACTGATAGCAAAGTCTGCCAGTGCAGAGAGTTCCTGTTCGGAAGTAATATCACAACGGCAGGCAAATGCCTGATCACCCAGTTGTTGAATTTCGTATACAACCTgg > 1:140602/1‑209 (MQ=255) gCACGGCGAAAATCCGCCATTGGCATATCAAACGGTTTAGGTCCACCGCAACCGGCGATGTTAACCAGAATATCAACTTTACCCAGCTTACTGATAGCAAAGTCTGCCAGTGCAGAGAGTTCCTGTTCGGAAGTAATATCACAACGGCAGGCAAATGCCTGATCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGa > 1:200123/1‑250 (MQ=255) aTCCGCCATTGGCATATCAAACGGTTTAGGTCCACCGCCACCGGCGTTGTTAACCAGAATATCACCTTTACCCCGCTTACTGATAGCAAAGTCAGCCAGTGCAGAGAGTTCCTGTTCGGAAGTAATATCACAACGGCAGGCAAATGCCTGATCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACt > 1:202613/1‑210 (MQ=255) gATAGCAAAGTCTGCCAGTGCAGAGAGTTCCTGTCCGGACGTAATATCACAACGGCAGGCAAATGCCTGATCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGacc > 1:133/1‑133 (MQ=255) tNNGAAGTANNATCACAACGGCAGGCAAATGCCTGATCACCCGGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGacc < 2:133/99‑1 (MQ=255) ggAAGTAATATCACAACGGCAGGCAAATGCCTGATCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGACCACCACAGAGGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCg < 1:145204/187‑1 (MQ=255) | CATTCAGTTCATAAGCACGGCGAAAATCCGCCATTGGCATATCAAACGGTTTAGGTCCACCGCCACCGGCGTTGTTAACCAGAATATCAACTTTACCCAGCTTACTGATAGCAAAGTCTGCCAGTGCAGAGAGTTCCTGTTCGGAAGTAATATCACAACGGCAGGCAAATGCCTGACCACCCAGTTGTTGAATTTCGTCTACAACATGGTTAGCTGCGTCGGCGTTAATATCACTGACCACCACAGATGCGCCAGCTGTCGCGAATGTAATGGCGATTTCTTTACCAATACCTGCACCCGCACCTGTGATGATGGCGCATTTTCCGTCG > NC_000913/1697686‑1698014 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |