Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,672,907 C→T W81* (TGG→TGA mdtI ← multidrug/spermidine efflux pump membrane subunit MdtI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,672,9070CT100.0% 12.0 / NA 6W81* (TGG→TGAmdtImultidrug/spermidine efflux pump membrane subunit MdtI
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (4/2);  total (4/2)

TAATTGGGGTGCAAAGTTCGGCTCCTGCCGCGAAAGATCGCTGGCGCGCCGATAACCGGGCCATTTCTGTTACCGGTTTTCGCGACAAGCTGGATCAACTGTCGCAAAAATAATGTTCAAACGCTGCCCGACAGCGCGGGCAGCGTCTTCATCAGGCAAGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATCCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGCATAAGCGACAGACAAGTCGATCCCTTTAACGGCTTGAGAAAGCGCACTAAAGGCAGCCAGCACCGCCGCCAGGGAGAGCAAGCCAAATATTT  >  NC_000913/1672669‑1673046
                                                                                                                                                                                                                                              |                                                                                                                                           
taattGGTGTGCAAAGGTCGGCTCCTGCCGCGAAAGATCGCTGGCGCGCCGATAACCGGGCCATTTCTGTTACCGGTTTTCGCGACAAGCTGGATCAACTGTCGCAAAAATAATGTTCAAACGCTGCCCGACAGCGCGGGCAGCGTCTTCATCAGGCAAGTTTCACCATTATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTTCGATTTAACCGTTGACCAAACAAGATTCAACCTGCGGc                                                                                                                                  <  1:204854/250‑1 (MQ=255)
                                                                                                aaCTGTCGCAAAAATAATGTTCAAACGCTGCCCGACAGCGCGGGCAGCGTCTTCATCAGGCAAGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATTCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGCATAAGCGACAGACAAGTCGATCCCTTTAACGGCTTGAGAAAGCGCACTAAAGGcagccagc                                 >  1:6030/1‑251 (MQ=255)
                                                                                                                      aaaccctcccagACAGCGCGGGCAGCTGCTACATCAGGCAAGTTTCCCCATTACCATCCCACCCAACAGCAAGACCAGGCCAATCCAACCTTTACGATTTAACCGTTGACCAAACAAGATTCATCCTGCGGCTAACGTGGCGTCAATACCAAACCCTCCCCACAATGCATAAGCTACAGACAAGTCGACCCCTTTAACTGCTTGAGAAAGCTCACTAAAGGCATCCAGCACCGCCGCCAGGGAGAGCAAGc           <  1:29275/240‑1 (MQ=255)
                                                                                                                               ccGACAGCGCGGGCAGCGTCTTCATCAGGCACGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATTCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGCATAAGCGACAGACAAGTCGATCCCTTTAACGGCTTGAGAAAGCGCACTAAAGGCAGCCAGCACCGCCGCCAGGGAGAGCAAGCCAAATAttt  >  1:172341/1‑251 (MQ=255)
                                                                                                                                          ggCAGCGTCTTCATCAGGCAAGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATTCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGCATAAGCGACAGACAAGTCGATCCCTTTAACGGCTTGAGAAAgcgc                                                 >  1:61165/1‑193 (MQ=255)
                                                                                                                                                         aGGCAAGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATTCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGc                                                                                              >  1:73414/1‑133 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                           
TAATTGGGGTGCAAAGTTCGGCTCCTGCCGCGAAAGATCGCTGGCGCGCCGATAACCGGGCCATTTCTGTTACCGGTTTTCGCGACAAGCTGGATCAACTGTCGCAAAAATAATGTTCAAACGCTGCCCGACAGCGCGGGCAGCGTCTTCATCAGGCAAGTTTCACCATGATCATTCCAGCCAACAGCAAGACCAGGCCAATCCAGCCTTTACGATTTAACCGTTGACCAAACAAGATCCAACCTGCGGCTAACGTGGCGGCAATACCAAACCCGCCCCACAATGCATAAGCGACAGACAAGTCGATCCCTTTAACGGCTTGAGAAAGCGCACTAAAGGCAGCCAGCACCGCCGCCAGGGAGAGCAAGCCAAATATTT  >  NC_000913/1672669‑1673046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: