| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,509,605 | C→T | A33V (GCT→GTT) | hicB → | antitoxin of the HicA‑HicB toxin‑antitoxin system/ DNA‑binding transcriptional repressor HicB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,509,605 | 0 | C | T | 100.0% | 13.7 / NA | 6 | A33V (GCT→GTT) | hicB | antitoxin of the HicA‑HicB toxin‑antitoxin system/ DNA‑binding transcriptional repressor HicB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (4/2); total (4/2) | |||||||||||
AACTCGGTTTGAGT‑TAATCGCCAATTAAAAAGGTTAA‑TGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTT‑ACACCCGCGCCGGAAGGCGGTTATA‑TGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGG‑CGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGATTAC > NC_000913/1509446‑1509830 | aacTCGGTTTGAGTGAAACCGCCA‑TTAAAAAGGTTAACTGA‑AAGCGAGGGACAATCCAAATTATGGGGTATCCCGTCCCTCTTTAC‑CCCGCCCCGGGAGGCCGTTATAGTGGTT‑GTTTTTTTGATTTCCCTGAAAGGTTGACCCAGGGGCAAACCGGTGTTTAAACCAATGAAACCGGCAAA‑GATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTan < 1:136912/240‑2 (MQ=255) gCCAATTAAAAAGGTTAA‑TGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTT‑ACACCCGCGCCGGAAGGCGGTTATA‑TGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGG‑CGAAACTGTCGTTGAAGCGATGGAAGCg > 1:71424/1‑157 (MQ=255) gTCACTCTT‑ACACCCGCGCCGGCCGGCGGTTATA‑TAGTTTCTTTTGTGGATATCCCTGAAGCGTTGACACAGGG‑CGCAACTGTCGTTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCT‑ATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTGCTGTTAAATGCTTTTTTAc > 1:74674/1‑249 (MQ=255) gTTATA‑TGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGG‑CGAAACTGTCGTTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCctc > 1:186003/1‑193 (MQ=255) tatCCCTGAAGCGTTGACCCAGGG‑CGAAACTGACGTTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCGTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTg < 1:221179/181‑1 (MQ=255) gCGTTGACCCAGGG‑CGAAACTGTCGTTGAAGCGATGGAAGCGGCAAAAGATGCTTTACCGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATAACTTTATTGAAGTACCTTTGTGCGTCGCATCTAAGGTATTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGATTAc > 1:197310/1‑251 (MQ=255) | AACTCGGTTTGAGT‑TAATCGCCAATTAAAAAGGTTAA‑TGACATGCGAGAGACAGTCGAAATTATGCGTTATCCCGTCACTCTT‑ACACCCGCGCCGGAAGGCGGTTATA‑TGGTTTCTTTTGTGGATATCCCTGAAGCGTTGACCCAGGG‑CGAAACTGTCGCTGAAGCGATGGAAGCGGCAAAAGATGCTTTACTGACCGCATTTGATTTTTATTTTGAAGATAACGAGCTTATCCCTTTACCTTCGCCATTAAATAGTCACGATCACTTTATTGAAGTACCTTTGAGCGTCGCCTCTAAGGTATTGCTGTTAAATGCTTTTTTACAGTCAGAAATCACTCAGCAAGAGTTAGCCAGGCGAATTGGCAAACCTAAACAGGAGATTAC > NC_000913/1509446‑1509830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |