| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 855,711 | C→T | A12T (GCC→ACC) | ldtB ← | L,D‑transpeptidase LdtB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 855,711 | 0 | C | T | 100.0% | 41.5 / NA | 17 | A12T (GCC→ACC) | ldtB | L,D‑transpeptidase LdtB |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (6/11); total (6/11) | |||||||||||
GCTGCGGAATGTTCAGTACAGTACCGCCTTTCGGCAGGAAGGTATCCACACCCGGGTTCGCTTCCATCATATTGGAAAGCCCCATCTGGTACTCGGCGGCAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAGGATCTTCTTTCAG > NC_000913/855477‑855913 | gctgcGGAATGTTCAGTACAGTACCGCCTTTCGGCAGGAAGGTATCCACCCCCGGGTTCGCTTCCATCATATTGGAAAGCCCCATCTGGTACTCGGCGGCAAAATACTCCAGCGGCTGAGTGTTACCGTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGTGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGtt < 1:169688/251‑1 (MQ=255) gCAGGAAGGTATCCACACCCGGGTTCGCTTCCATCATATTGGAAAGCCCCATCTGGTACTCGGCGGCAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTtg > 1:50243/1‑251 (MQ=255) cGGGTTCGCTTCCATCATATTGGAAAGCCCCATCTGTTACTCGGCGGCAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGTTCGCTGCTAATAATGTTGTCAATTTCATATTCATGTTAAGCGATATTTTGTGCCTGGCAGGCCATTggg < 1:197404/251‑1 (MQ=255) tangcgncNNANNACTNCAGCGGCTGAGTGTTACCTTCNNGAATGGTGANCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTANCGCAGAGGCNNTANTGCAANANNNGNNNACNGCGAAGGTCGCTGCGAATANTGNNTTCAATNTCATATTCATGTTAAGCGAGATTTtg < 2:50243/189‑1 (MQ=255) gcggcAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTcc > 1:167091/1‑251 (MQ=255) gcggcAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTcc > 1:167098/1‑251 (MQ=255) aaTACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTcac < 1:6967/251‑1 (MQ=255) aCCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCTACTCCCGTCGGTTGGCAGAGTATAAGTTACCGCAGAGGCGGTACTGCAAAAGCAGACAATAGCGAATGTCGCTGCGAATAATGTTTTCAAGTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGTTTGAGAATATTAGAGTATTAGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGa < 1:140987/250‑1 (MQ=255) gATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTGGTGCCTGGCAGGCCATTGGGTTgag < 1:71559/169‑1 (MQ=255) nnnnnnnnnnnancanncaGGNGACTCCCGTCGGTGGGCAGAGGATNAGTTACCGCAGAGGCGGTACTGCAAAAGCCGNCNACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTANGCGAGAGTGTNTGCNNGGCANGNCNTTTGGTTGAGAATACTAGAGTATTGGAAGNTCATTATAAGTGCATTCCAGCTCNNGGNNNAANNAGAtg < 2:157276/213‑1 (MQ=255) gACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTCCTGCAAAAGCCGACCACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTTCTATTCATGTTAAGCGCGATTTTTTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGCAGCGCATTATAAGTTAATTCCAGCTCCCAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGa > 1:152510/1‑247 (MQ=255) gACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTGCCCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCATGCCATTGGGTTGAGAAGATTAGAGTATTGGAAGCGCATTATAAGTGCATGCCAGCTCACAGTGAAATCATATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAg < 1:188337/248‑1 (MQ=255) cTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCtn < 1:43563/123‑2 (MQ=255) ccGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACCGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCgagg > 1:151548/1‑249 (MQ=255) ngATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGcc > 1:137013/2‑112 (MQ=255) ggATAAGTTACCGCAGAGGCGGTACTGCAAACGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGcc < 2:137013/112‑1 (MQ=255) gATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGTCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAGGATCTTCTTTCAg < 1:71870/251‑1 (MQ=255) | GCTGCGGAATGTTCAGTACAGTACCGCCTTTCGGCAGGAAGGTATCCACACCCGGGTTCGCTTCCATCATATTGGAAAGCCCCATCTGGTACTCGGCGGCAAAATACTCCAGCGGCTGAGTGTTACCTTCAGGAATGGTGATCACCTGATTCTGACCAACCAGGCGACTCCCGTCGGTTGGCAGAGGATAAGTTACCGCAGAGGCGGTACTGCAAAAGCCGACAACAGCGAAGGCCGCTGCGAATAATGTTTTCAATTTCATATTCATGTTAAGCGAGATTTTGTGCCTGGCAGGCCATTGGGTTGAGAATATTAGAGTATTGGAAGCGCATTATAAGTTCATTCCAGCTCACAGTGAAATCAGATGTGTACGAAATCACATTTTTTGCCTTTGGCTTGAGTGTAGACCTTAAGCGAGGAGCAGGATCTTCTTTCAG > NC_000913/855477‑855913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |