| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,319,653 | G→A | F337F (TTC→TTT) | phnI ← | carbon‑phosphorus lyase core complex subunit PhnI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,319,653 | 0 | G | A | 100.0% | 26.1 / NA | 10 | F337F (TTC→TTT) | phnI | carbon‑phosphorus lyase core complex subunit PhnI |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (4/6); total (4/6) | |||||||||||
CAGCACGTCGCTTTCGCCAATCACGCTGGCGGTAAGCTGAATGCCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCGCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGC > NC_000913/4319409‑4319849 | cAGCACGTCGCTTTCGCCAATCACGCTGGCGGTAAGCTGAATGCCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGGTCGTCGCCGCTTTTAAGATGGCGGGGCGGATCATGCGTTTGGTCGTCTCGTGGGGGTTGGCAAAGTTGTAGGTGCTCAGATTAGCCATGGTTCTGCTCCTGGTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGAAAATc < 1:30197/250‑1 (MQ=255) ccGGGGATCGCCACCGCTTTTAGGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGAAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCgg > 1:10263/1‑188 (MQ=255) gCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGTAAAGTTGTAGCCGCTCATATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTATCTCCAGTTCGGTCTGAAAATCGACGTAGTGGGGGAGTTTGa < 1:198356/158‑1 (MQ=255) gATCATGCGTGTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGAAAATCGACGTAGTGGGGGAGTGTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGTCATGTGCCAGCACGAACTCTTCATCCTgn < 1:63294/197‑2 (MQ=255) cATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGAAAATCGACGTAGTGGGGGAGTTTGAGGTGNGAGNNNNNGcnnnnnn > 2:135476/1‑144 (MQ=255) tAGCCATGGTTCTGCTCCGGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGAAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCAGCCTGCGCCGGGCCTGTCGCTTGCTCGCCGGACTCCGGGGCTTGCAGAGCGCGGTCGATCAGCGCCATCGCCATCGCTTTGCTCTCGCTCATGCCGAACACCAGCCCGTAGc < 1:142147/250‑1 (MQ=255) aNNCATGGTNNAGCTCCTGTTGCAGTCGTTTGAGTAGCTCAAGTTCGGCCTGAAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCgg < 2:10263/99‑1 (MQ=255) gACGTTTGAGTAGCTCCAGTGCGGCCTGAAAATCGACGTAGTGGTGGAGTGTGAGGTGTGAGACAAAGCCGGCGGCTGCGACGTTGTCGGCATGTGCCAGCACGAAct < 1:87090/108‑1 (MQ=255) gACGTNTCAGTNGNNCCAGTTCGGCCTGAAAATCNACGTAGTGGGGGAGTNTGAGNTGTGANACna > 2:87090/1‑66 (MQ=255) gCCTGAAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACACAGCCTGCGGCTTAGACGTTGTCGGCATGTGCAAGCACGAActc > 1:37675/1‑86 (MQ=255) | CAGCACGTCGCTTTCGCCAATCACGCTGGCGGTAAGCTGAATGCCGCCGGTTCCCCAGCCGTACGGCATCGGCATCTCGCGCCCGCCAAACGGCACCTGATAACCGGGGATCGCCACCGCTTTTAAGATGGCGCGGCGGATCATGCGTTTGGTCTGCTCGTCGAGGTAGGCAAAGTTGTAGCCGCTCAGATTAGCCATGGTTCTGCTCCTGTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCGCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGC > NC_000913/4319409‑4319849 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |