| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,878,067 | C→T | intergenic (+449/+502) | iap → / ← cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,878,067 | 0 | C | T | 100.0% | 11.9 / NA | 7 | intergenic (+449/+502) | iap/cas2 | alkaline phosphatase isozyme conversion protein/CRISPR‑associated endoribonuclease Cas2 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (1/6); total (1/6) | |||||||||||
GTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTA > NC_000913/2877825‑2878196 | gTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCTGGTTTATc < 1:46027/251‑1 (MQ=255) cGCTGGCGCGGTGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGGGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGGGGTTTATCCCCGCTGGCGCGTGGAACTCAAGCTGGCTGGTAATCGCTTGCGGGGTGAGTCTGGTTTATCCCCTCTGGCTCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGgc < 1:151688/251‑1 (MQ=255) aTAATGTTTACGTTCATGCGCCCCCCGGTGTCGCCCCGCGGGCGCGTGGAACTCTGGGCGGCTTGCCGTGCAGCCAGCTCCAGCAGCGGTTTACCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGTGTGAGTCTGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTAACTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCTGCGAcgc < 1:38047/251‑1 (MQ=255) aTAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCTGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGAc < 1:207863/209‑1 (MQ=255) ggTTTATCCCCGCTGGCGCGGGGAACGCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCTGGTTTATCCCCGCTGGCGCGGGGAACGCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTTGCTCTGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCTGTTTa < 1:106068/251‑1 (MQ=255) cTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCGGGCTGGCAATCTCGTTCGGGTTGAGTCTGGTGTATCCCCGCGGGCGCGGGGAACTCTAGTTTCCGTATCTCCGTATTTATAAAGCTGACTGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATgcgc < 1:153159/187‑1 (MQ=255) cccGCTGGNGNNNGNNCCTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCTGGTTTATNCCCGCTGGCGCGGGGNAcnc > 2:154053/1‑81 (MQ=255) | GTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGGCGGCGACGCGCAGGGTATGCGCGATTCGCGGTTTA > NC_000913/2877825‑2878196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |