| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,118,475 | G→A | intergenic (‑71/+205) | wcaK ← / ← wzxC | colanic acid biosynthesis pyruvyl transferase WcaK/colanic acid repeat unit flippase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,118,475 | 0 | G | A | 100.0% | 16.2 / NA | 8 | intergenic (‑71/+205) | wcaK/wzxC | colanic acid biosynthesis pyruvyl transferase WcaK/colanic acid repeat unit flippase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/3); total (5/3) | |||||||||||
GCGTGTGGATTGAGAATGTTGATGGCATCAAGTAAGCCGCGCAGGATGGCGCTGTCGCCACGATTGCCGCAAGTGTGGTTGCCCAGAATAAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCG > NC_000913/2118304‑2118718 | gCGTGTGGATTGAGAATGTTGATGGCATCAAGTAAGCCGCGCAGGATGGCGCTGTCGCCACGATTGCCGCAAGTGTGGTTGCCCAGAATAAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCAACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCg < 1:76255/234‑1 (MQ=255) ggATTGAGCATGTTGATGGCATCAAGTAAGCCGCGCAGGATGGCGCTGTCGCCACGATTGCCGCAAGTGTGGTTGCCCAGAATAAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCAACGCTg > 1:7253/1‑172 (MQ=255) nttGCCCAGAATAAGTCATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCAACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGAc > 1:56714/2‑147 (MQ=255) tNNCCAGAANNAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCAACGCTg < 2:7253/99‑1 (MQ=255) gCCCAGAATAAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCAACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGt > 1:119518/1‑251 (MQ=255) tCATAAAGTTGATGCCAGGGTAGTCTGCGTTTGTGTTGTTCGTTGCCTCTTTTTGCCTGATGCATCGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCAc < 1:29940/131‑1 (MQ=21) ncTGATGCAACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGaa > 1:128286/2‑148 (MQ=255) cTGATGCAACGCTGAAGCGTCTTATCAGGCCTACAAGACCAGAGCACAGACACGTAGGCCGGATAAGGCGCTCACGCCGCCTCCGGCATTCACTGACTCATGCGACGCTGACGCGTATTATCAGGCCTACAGGTCCCGACCACCGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTAATTTTTTCGCTGCg > 1:154497/1‑251 (MQ=255) | GCGTGTGGATTGAGAATGTTGATGGCATCAAGTAAGCCGCGCAGGATGGCGCTGTCGCCACGATTGCCGCAAGTGTGGTTGCCCAGAATAAGTAATTTCATTTTTTCCTCATAAATTTGATGCCAGGTGAGGCTGCGTTTGTTTTGTTCGTTGCCGCTTTTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAAGACCCGAGCACAGAACCGTAGGACGGATAAGGCGTTCACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAGGTCCCGAGCACAGAACCGTAGGACGGATAAGGCGTTTTACGCCGCATCCGGCAACCGTTGTCGGAACCGAAAACAGCAACTCACCCCGCCCGTAAAAGCATTTTCATTTTTTCGCTGCG > NC_000913/2118304‑2118718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |