| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 3,737,137 | IS2 (+) +5 bp | coding (37‑41/825 nt) | bax ← | putative glycoside hydrolase Bax |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3187426 | NA (NA) | 9 (0.950) | 6/312 | 0.3 | 100% | noncoding (1331/1331 nt) | IS2 | repeat region |
| ? | NC_000913 | 3737137 = | 0 (0.000) | coding (41/825 nt) | bax | putative glycoside hydrolase Bax | |||||
| * | ? | NC_000913 | = 3737141 | 1 (0.110) | 10 (1.050) | 8/314 | 0.1 | 90.6% | coding (37/825 nt) | bax | putative glycoside hydrolase Bax |
| ? | NC_000913 | 4498181 = | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
GCATTTTGGCTGGTAATGTAAGGCATTACGGTCCGGAGAAACGCCTTTTTCCTTGGTGTTCCGGAAGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTGC > NC_000913/3736900‑3737382 | gCATTTTGGCTGGTAATGTAAGGCATTACGATCCGGAGAAACGCATTTTTACATGGGGTTCAGGAAGGGGATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACAATTGCCAGAACCCCCTTGTTTCCTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGCACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTACCACCTAACTCGAACACACCAGAGTGAGTAACATAAGAATtagactggc > 1:212364‑M1/1‑242 (MQ=255) ngataaagcgtgactacatcagtatcatgcccaacccagacgggttaacggcagcaaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGtctc > 1:137879‑M2/203‑251 (MQ=255) ggAAGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGAGAGACTAGTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGCCTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccacctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt > 1:100578‑M1/1‑180 (MQ=255) aGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaagctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagan < 1:26138‑M1/251‑75 (MQ=255) gCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgataggcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggc < 1:99833‑M1/250‑111 (MQ=255) tGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattg < 1:168012‑M1/217‑99 (MQ=255) cgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatatagtggcaaatccaAGAATCATCGCCCCATATCGGCGTATGGGAGTCAAAATCATCAGGGCTCCTGGTCGGATTTAATCATTCCAACACCTGATAGTTTTCACAAATTTGATAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAagag < 1:121403‑M2/137‑1 (MQ=255) nnnnnncgnnnnntgcnctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAatcat < 2:128777‑M2/41‑1 (MQ=255) ncatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAatcat > 1:128777‑M2/109‑149 (MQ=255) gCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaga > 1:118093‑M1/1‑111 (MQ=255) cgggaatttctgcggcagcggtcttgtaatgggttaagtgataacagatgtctgtaaatataggggtaaatccaAGAATCAGCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCATGGTCGGATTTAATCTTTCCAACTCCGTGTGTTTTTCACAAATTTGAGAGTTGAATCTCAAATCATAGCAAAAATAGCTGTCCAGAGCACCCCCAGGAATAGTCCAAATCTGAAACTATGTCACgtg < 1:163798‑M2/177‑1 (MQ=255) ngcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAGAATCATAGCCCCATATCGTCGTAt > 1:39077‑M2/55‑80 (MQ=255) gtgCGTCTTCGCTACCACCTCACTCGAAAACACCAGAGTGAGTAACATCAGAATtagactggccccctgcatctacagacaaccaatatcacttaaatcagtgatagtcttactactagtttttagactagtcattggagaaccgatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttc > 1:30798‑M1/1‑54 (MQ=255) naccTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 1:136623‑M1/2‑39 (MQ=255) ccTCACTCGAAAACACCAGAGTGAGTAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaac < 1:184557‑M1/210‑174 (MQ=255) taggggcaaatccaAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTtac > 1:125548‑M2/15‑76 (MQ=255) tgagtAACATAAGAATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaagatcgcaattgttcagcagagctttgaaccggggatgacg > 1:8159‑M1/1‑16 (MQ=255) atccaaGAATCAGCGCCCCATATCGTCGTATGGGAGTCAAAAGCATCAGGTCACCTGGTCGGATTTAATCATTCCAACGAGTTAGATTTTTCACAAATTTGAGAGTTGAATCTCAAAGCAGATCAAAAATAGCTGTCAAGAGCACACCAATGAAGAGTGCAAATGAGAAACTATGTCACGTGATGACGAAGCAGATTGGCCAGAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTgc < 1:105718/247‑1 (MQ=255) caAGAATCATCGCCCCATATCGTCGTNTGGGAGNNAANATCATCAGGTCTCCTGGTCNGANNNANNNANTCCAANACNNTATATTTTTNACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACNCCAAGGAATNNTCCAAATCTGAAACTATGTCANGTGNNANNGNTTc > 2:46687‑M2/3‑189 (MQ=255) caAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGc < 1:46687‑M2/236‑1 (MQ=255) | GCATTTTGGCTGGTAATGTAAGGCATTACGGTCCGGAGAAACGCCTTTTTCCTTGGTGTTCCGGAAGGGTATTTTCGCAAATCAGGAAGTGAACTACTCTTTGCACTATTGCGAGAATACTCTTGTTTACTGCTTACCTGTTTATTACTAGCTTTAGTTAAGTGGGACTTTTGACTCGCTGTTGTTGTGTGCGTCTTCGCTAACACCTCACTCGAAAACACCAGAGTGAGTAACATAAGAATCATCGCCCCATATCGTCGTATGGGAGTCAAAATCATCAGGTCTCCTGGTCGGATTTAATCATTCCAACACCTTATATTTTTCACAAATTTGAGAGTTGAATCTCAAATCATATCAAAAATAGCTGTCAAGAGCACCCCAAGGAATAGTCCAAATCTGAAACTATGTCACGTGTTAACGATTCAGATTGGCGCTAAATCGCAGAAAATGTGGGGGTTATCGCAAAATTCAGCCGTTTTTTGC > NC_000913/3736900‑3737382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |